| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3878 |
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| Symbol | |
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| ID | 5195544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4359354 |
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| End bp | 4359890 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588351 |
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| Product | hypothetical protein |
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| Protein accession | YP_001269186 |
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| Protein GI | 148549084 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0218712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.244199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC TCAGCGTTTT CCACCCCGCC AGCCCGGCAC TGCCGAACAA GGTGCTGACT
CACCACGACG ACATCGCCGC TACGTTGGCC GAGCAGGGCG TGCGCTTTGT GCATGCCGAA
CCTGGCCTGC GGGTGCGCCC GGGCACGGCC CAGGACGAGG TGCTGGAGGT TTGCCGGGGG
TATCTGGATG AGTTGATGAC GGCGCATGGC AGCAAGGCCT TCGCGCTGAT CAACCGCGAC
GGTGAAGACC CGGCACAGGT CGATGTGCGT GATGAACATG TGCATGATGC CGACGAGCTG
TTCGCCGTGG TCAGCGGGCG GGCGCAGGTT GGCCTGCGGC TGGGGGGCTG GGTGTATTCG
GTGCTGTGCG AGAAGGGTGA CCAGCTGCTG GTGCCGGCCG GGACGCGGCG CTGGGTTGAG
CTGGGTGATA CACCGTTTTG CCTGGCGTTG CGCTTGTATG GCAGCGAGCA GGGCATGCAG
GCGCGGTTTA CCGGGGATGT GACGGCGCGG GCATTTCTTG GGATCGACGA GCTGTAA
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| Protein sequence | MSILSVFHPA SPALPNKVLT HHDDIAATLA EQGVRFVHAE PGLRVRPGTA QDEVLEVCRG
YLDELMTAHG SKAFALINRD GEDPAQVDVR DEHVHDADEL FAVVSGRAQV GLRLGGWVYS
VLCEKGDQLL VPAGTRRWVE LGDTPFCLAL RLYGSEQGMQ ARFTGDVTAR AFLGIDEL
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