Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3752 |
Symbol | |
ID | 5192368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4204878 |
End bp | 4205525 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640588208 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001269060 |
Protein GI | 148548958 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAC TCAAGGTCAT CATCGCCGAC GATCACCCCA TCGTGCTGCT CGGCGTCCGG GAACTGGTCG AACGCGATCC ACGCTTTAGC GTGGTCGGCG AAGCCGTCTG TTCGCAAGGG CTGATCGAAC TGCTCGAACG CCAACCCGTG GACATGGTCA TCTCCGACTA CAACATGCCG GCAGACTCAC CCTACGGTGA CGGCCTGAAA CTGATCGACT ACCTCAAACG TCACTATCCC GCCGTCCGCA TCCTCGTGCT GACGATGATT TCCAACCCGC TGATCCTGAC ACGGCTGCAG GAACTGGGCG TGGACGGCGT GATCCAGAAG AGCCAGTTGC ATGGCGAAAT CGAAAAGGCC CTCAATGCCG TCGCCCGCAA CAGCACCTAC CGGGCGCCGG CACCGGCAAG GCAGTCGGTG ATCGCCTGTA ACACCGCCAT CGATCAACGG GTGGAAAACC TGTCACCCAA GGAATTCGAA ATACTGCGCC TGTTTGTTGC CGGACAAAGT GTCAGTGAGA TCGCCCGTAG CCAACATCGA AGTACCAAGA CCATTAGTGC GCAGAAAGTT TCCGCGATGC GCAAACTTGA AGTGAACAGC GATCAGGAAT TGTTGGCCTA TTGCCTGGCG AGTCATATCT TTAATTAA
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Protein sequence | MEKLKVIIAD DHPIVLLGVR ELVERDPRFS VVGEAVCSQG LIELLERQPV DMVISDYNMP ADSPYGDGLK LIDYLKRHYP AVRILVLTMI SNPLILTRLQ ELGVDGVIQK SQLHGEIEKA LNAVARNSTY RAPAPARQSV IACNTAIDQR VENLSPKEFE ILRLFVAGQS VSEIARSQHR STKTISAQKV SAMRKLEVNS DQELLAYCLA SHIFN
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