| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3706 |
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| Symbol | |
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| ID | 5191369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4150605 |
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| End bp | 4151492 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588162 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_001269014 |
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| Protein GI | 148548912 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACAC CTGTAATTCG CGGCGTTATC GGCTACACCA TCACTCCCTT CACGGCAGAC
GGCTCACTCG ACCTGGATGC CCTGGGCACG TCCATCGATA GCCTGATCGC AGACGGCGTG
CACGCCATCG CGCCGCTGGG CAGCACCGGC GAAGGGGCTT ACCTGTCCGA CAGCGAATGG
GAAACCGTGG TGCGCTTCAG CCAGGTACGC ATTGCCGGGC GCGTACCCAG CGTGGTCAGC
GTCTCCGACC TGACCACCGC CCGCACCGTG CAGCGTGCCC GCCTGGCACA GGCCTGCGGT
GCTACGGCGG TGATGGTGCT GCCCATCTCT TACTGGAAGC TCACCGAAGC CGAAGTGGTC
GCCCACTACA AGGCGGTCGG CGCCGCCATC GACATTCCGA TCATGCTCTA CAACAACCCG
GGCACCAGCG GCACCGACCT GTCGGTGGAG CTGATCCTGC GTATCCTCGG CGAAGTGCCC
ACTGTGACCA TGGTCAAGGA AAGCACCGGT GACATCCAGC GCATGCACCG CCTGTTCACG
GCTACAGATG GTCAGGTGGC GTTCTACAAC GGTTGCAACC CGCTGACCCT GGAAGCCTTG
GTGGCCGGCG CCACGGGCTG GTGTACCGCC GCGCCCAACC TGATCCCTGC ACTCAACCTG
GCACTGTGGG ACGCCGTACA ACAAGGCGAT CTGGCCGAAG CCCGTGCGTT GTTCTACCGC
CAGTACGAGC TGCTGGAGTA CATCACCCGC CGTGGCCTGC CGACCACCAT CAAGGCCGGC
CTGAAAATGC TCGGCCAGGA GGTCGGCGCC CCACGCCTGC CCCTGCAGCC GCTGGATGCG
CAAGGCAGCA ACCACCTGAA AAACCTGCTG GTGGCGCTGA CCAACTGA
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| Protein sequence | MSTPVIRGVI GYTITPFTAD GSLDLDALGT SIDSLIADGV HAIAPLGSTG EGAYLSDSEW
ETVVRFSQVR IAGRVPSVVS VSDLTTARTV QRARLAQACG ATAVMVLPIS YWKLTEAEVV
AHYKAVGAAI DIPIMLYNNP GTSGTDLSVE LILRILGEVP TVTMVKESTG DIQRMHRLFT
ATDGQVAFYN GCNPLTLEAL VAGATGWCTA APNLIPALNL ALWDAVQQGD LAEARALFYR
QYELLEYITR RGLPTTIKAG LKMLGQEVGA PRLPLQPLDA QGSNHLKNLL VALTN
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