| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3674 |
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| Symbol | |
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| ID | 5195053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4111077 |
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| End bp | 4112495 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640588130 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001268982 |
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| Protein GI | 148548880 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTAC TGCACTCATT TCCAGGCCCT GCCCGGCTTG CCACAGCCCT CGGCATGCTC
GCTGCACTCG CGGCGTGCGG CCACCAACCC ACGCCTGCCG AACCACCTCC AGCGCTGCAG
GCAGACCCGC TGGCGAACAT GCCGGCCAGC GTCAGCAAAC AGCCCCTGCC CGAACGCTGG
TGGGCACTGT ATCAAGACCC CCAACTCAAC CGCTGGGTAC AGCAAGCCCT GGCGCACAAC
CAAGGCCTGG CACAGGCCGA GGCCAACGTG CAGGCCATGC TGGCCGGCAT CGGCGAGTTC
GACGCCAGGC GCTGGCCGTC TACCGCGATG GGCGTTGCCG CTACCTATGG AAGAAGCGCC
GATGACCAGA CGCTGGCCGA GGCGACCGAC AGCAACGCGC CGTCACAATG GCAATTCAAC
CCGGGCATCG AGCTGGCCTA TCAGGTGGAT ATCTGGGGCC AGGTACGCGC CGCCATCCAA
CGTGCCCGGG TGCAAGCCGA AGCCAGCGCT GCGGCACTAG ACCTGGTACG CCTGCAGGTA
GTCGCCCAGA CCACCCGCGC CTACATCGAC CAGTGCACCT ACGCGGCCCG CCTGGAGGCA
GCGAAGCAGG CCTTGCAAAC CCTCGACCAC AGCGTGCAAC TCAGCCAGCG TCAGCGCCAG
GCCGGTGTGG CCACTGCCCT CGACGGCGAG CGCCTGTTGG GCTTGCGGGA GCAGGTGCGT
GCGCAACTGC CGATGCTCTC AGCCCGGCGG CAGATGGCGC TTTACGAACT GAGCATGCTC
AGTGGCCAGG CCTCGGTGGC CGAAGCCAGG ACCTGCGTAG CCATCCCCAC GCTGTCGGCG
CCGCTGCCGG CTGGCGATGG CTGGCATTTG CTCGAACGCC GGCCAGATGT GCGCCAGGCC
GAACGGGAAC TGCAGGCGGC CACCCTGGAG ACCGACATCG TGCGGGCTGA CCTTTACCCA
AAGGTCAGCT TCGGCGCTTC GTTGACGTCT TCAGACCATC ACCTTGCCAA CCTCGGCGCC
AGTCGCGCGG TGATGTTCGG CATTGGCCCG CTGATCCGCT GGGAATTTCC CAACCTGCAG
GCCAACCGCG CACGGGTGAG CAAAGCCGAG GCATTGCAGC GGGCGCAGGT CGCCCGTTAC
CACGGCGTGG CGCTGAGCGC GCTGAAAGAC GTGCGCCAGG CACTGGCCCG CTACGACGGC
GAGCGACAAC GGTTGCAGGC GCTGGACGCA GCCCTGGTGC ACAGCCAGCA CAGCTTTGCC
CTGGCCCAGG GTAACTACCG TGCCGGCACC GTGGACGGGC TGGCCCTGCT CGACAGCGAG
CGCGAAATGA TCAGCCTGCG GGCCAGCCAC ACAGAAGCCC GAGGGCGCCT GGCGCAAGCG
CAGGTAAACC TGTTCCGCGC GCTGGGCGGG CGGTGGTAG
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| Protein sequence | MPLLHSFPGP ARLATALGML AALAACGHQP TPAEPPPALQ ADPLANMPAS VSKQPLPERW
WALYQDPQLN RWVQQALAHN QGLAQAEANV QAMLAGIGEF DARRWPSTAM GVAATYGRSA
DDQTLAEATD SNAPSQWQFN PGIELAYQVD IWGQVRAAIQ RARVQAEASA AALDLVRLQV
VAQTTRAYID QCTYAARLEA AKQALQTLDH SVQLSQRQRQ AGVATALDGE RLLGLREQVR
AQLPMLSARR QMALYELSML SGQASVAEAR TCVAIPTLSA PLPAGDGWHL LERRPDVRQA
ERELQAATLE TDIVRADLYP KVSFGASLTS SDHHLANLGA SRAVMFGIGP LIRWEFPNLQ
ANRARVSKAE ALQRAQVARY HGVALSALKD VRQALARYDG ERQRLQALDA ALVHSQHSFA
LAQGNYRAGT VDGLALLDSE REMISLRASH TEARGRLAQA QVNLFRALGG RW
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