Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3662 |
Symbol | |
ID | 5191723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4096401 |
End bp | 4097306 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588118 |
Product | DNA-binding transcriptional regulator LysR |
Protein accession | YP_001268970 |
Protein GI | 148548868 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACTGT CCGTCCGCCA CATCGAAGTG TTCCGCGCCA TCATGGCCGC TGGTAGTGTC ACCGGTGCGG CGCGCCTGCT GTTCACCTCG CAGCCGACCG TCAGCCGCGA ACTGGCGCGG CTGGAGCAGG TGACTGGCCT GAACCTGTTC GAGCGCGAGG GCGGGCGCCT GGTGGCGACG GCCCAGGCGC TGCTGTTGAT CGAAGAGGTC GAGCGCGCCT ACGTCGGGCT GGAGCGGATC GATCGCTTTG CCCAGGCCAT CCGCAACTTC GAGCAGGGCC GGTTGGCCAT CACTTGCCTG CCGCTGTTCT CGCAAACCTT GTTGCCCAAG GCCTGCCAGC GCTTTCACCA GCAGCACAGC GGCGTGAGTG TGAGCATTCT GGCGCAGGAG TCGCCTTTGC TGGAGGAGTC ACTGGTTGCC CAGCAGCATG ACCTTGGCCT GACTGAGGTC GAACAGATAC CGCGCGGCGC GTATGGTGAA TTGCTGTTCA GTGCCAACAT GGTGTGCGTG TTGCCCGAGC ATCACCCGCT GCAGGTGAAG GCTGAACTGG AGCTGAGTGA TTTCCATGAG GTCGATTTCA TCAACCTGGC CAGCCTGGAT ACCTACCGCC AGCGTCTGGA TCAGCACTTT CGTGCGGCCG GGGTTAACCG CCGCACGGTC ATCGAAACCA CCAGTGCCGC TTCGGTGTGC GCCATGGTCA GGCAAGGCCT GGGGGTGGCG ATCATCAACC CGCTGAGCGG GCTGGAGGCG GCGCAAGGCG GGTTGCCGAT CCGCAGGTTA CGGGTTTCGG TGCCCTATCA GGTGATGCTG ATACGCCCGG ACCATCGGCC GGCATCGGCA GCGGTGGAGC CGTTTTGCGA GGCGTTGCGG GTGCAGGCCA AAGAGATGCA GCAGGCGCTG GCCTGA
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Protein sequence | MKLSVRHIEV FRAIMAAGSV TGAARLLFTS QPTVSRELAR LEQVTGLNLF EREGGRLVAT AQALLLIEEV ERAYVGLERI DRFAQAIRNF EQGRLAITCL PLFSQTLLPK ACQRFHQQHS GVSVSILAQE SPLLEESLVA QQHDLGLTEV EQIPRGAYGE LLFSANMVCV LPEHHPLQVK AELELSDFHE VDFINLASLD TYRQRLDQHF RAAGVNRRTV IETTSAASVC AMVRQGLGVA IINPLSGLEA AQGGLPIRRL RVSVPYQVML IRPDHRPASA AVEPFCEALR VQAKEMQQAL A
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