| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3573 |
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| Symbol | |
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| ID | 5194229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3988562 |
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| End bp | 3989572 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588028 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001268881 |
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| Protein GI | 148548779 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAA AATCAGGCTT GAAGCCACAA CCCACGCGCC CTGAGCCGTC ACGCCGCTTC
AGCGTTGCCC CCATGATGGA CTGGACCGAC AGGCACTGCC GGTTCTTCCT GCGCCTGCTC
TCCCGGCAAA CCCTGCTCTA CACCGAAATG GTCACCACCG GTGCCCTGCT GCACAACGAC
GCTCACCGTT TCCTGCGCCA CGATGCTTCT GAGCACCCGT TGGCCCTGCA ACTGGGCGGC
AGTGTGCCGG CCGACCTGGC CGCGTGTGCG CGCCTGGCTG AAGAAACGGG CTACGATGAG
GTCAACCTCA ACGTTGGCTG CCCGAGCGAC CGGGTGCAGA ACAACATGAT CGGCGCGTGC
CTGATGGCTC ACCCGGCGCT GGTGGCCGAC TGCGTGAAGG CCATGCGAGA TGCCGTATCG
ACGCCTGTCA CGGTGAAGCA CCGCATTGGT ATCAACGGCC GTGACAGCTA CGCCGAACTG
AGCGACTTCG TCGGCCAGGT GCGTGAGGCC GGCTGCCGGA GTTTTACCGT GCATGCACGC
ATCGCGATTC TGGAAGGGCT ATCGCCGAAA GAGAACCGCG AGATCCCGCC GCTGCGCTAT
GACATCGCAG CGCAGTTGAA GAGGGACTTC CCGGACCTGG AGATCGTGCT CAACGGCGGG
ATCAAGACCC TGGACGAATG CCAGGCACAC CTTGAAACCT TCGATGGCGT GATGCTGGGG
CGCGAGGCGT ATCACAATCC TTATCTGCTG GCCGAGGTGG ACCAGCAACT GTTTGGCAGC
GATGCGCCGG TGGTCAGCCG TAGCGAGGCA TTGGCGCAAC TGCGGCCTTA CATCGTGACG
CATATGGAAA GTGGCGGTGC GATGCACCAC GTTACCCGGC ATATTCTGGG GCTGGCCCAA
GGATTCAAAG GGGCGCGGCG CTTCCGCCAG TTGCTGTCGG CAGACATTCA CAAGGCGGCC
GAACCCTTGG CGGTGTTTGA CCAGGCCGTG GAGTTGTTGC AGGGGCGGTG A
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| Protein sequence | MTAKSGLKPQ PTRPEPSRRF SVAPMMDWTD RHCRFFLRLL SRQTLLYTEM VTTGALLHND
AHRFLRHDAS EHPLALQLGG SVPADLAACA RLAEETGYDE VNLNVGCPSD RVQNNMIGAC
LMAHPALVAD CVKAMRDAVS TPVTVKHRIG INGRDSYAEL SDFVGQVREA GCRSFTVHAR
IAILEGLSPK ENREIPPLRY DIAAQLKRDF PDLEIVLNGG IKTLDECQAH LETFDGVMLG
REAYHNPYLL AEVDQQLFGS DAPVVSRSEA LAQLRPYIVT HMESGGAMHH VTRHILGLAQ
GFKGARRFRQ LLSADIHKAA EPLAVFDQAV ELLQGR
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