Gene Pput_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3566 
Symbol 
ID5191404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3983620 
End bp3984183 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content57% 
IMG OID640588022 
ProductTetR family transcriptional regulator 
Protein accessionYP_001268875 
Protein GI148548773 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.730164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAATA CCCGTGAGCG TTTGATTGAT GCCGCGCTGA AGCTGTTTCT GTTGCAAGGT 
GTATACGTGA CGGGGGTAAC GGCCATTGCC GCGATGGCGG GAGTTACCAA AATGACGCTC
TACAGCCATT TCCCCTCCAA GGATGCGCTG ATAGTGGCGT GCCTTGAGGA GCGTGACCGA
CGCTGGCGTG AAGAGGTAGC GTGCACCTTG GCCAGGCATC CTGAGCCGGT CAGTGGCATG
CTCGCTTTTT TCGATCTGTA TGAACGCTTT CTTTTAAAAG ATAGCGAGCG CGGGTGCCTG
TTCGTCAACA GTGCGGCTGA ATTCCCCCAG TTTAGCCACC CCGTGCATTT GGCAGTGAGC
CGGCATAAGC AAGGGATACG CGAAAACCTT GCTGCATTGG CCATGAGCGC CGGGATAAGC
GACCCTGACG CAGTTGCCCA GGGGCTGTTT ATCTTGCTGG AGGGCAGTTT TGTCAGCGGC
GCGATGGGCC AGGACATGCG GGTATTCGAC ACTGCCCGGC AAATAGCTCA TTGCTGGATC
CAGAGGCAGG AGCAGGGCGT ATGA
 
Protein sequence
MDNTRERLID AALKLFLLQG VYVTGVTAIA AMAGVTKMTL YSHFPSKDAL IVACLEERDR 
RWREEVACTL ARHPEPVSGM LAFFDLYERF LLKDSERGCL FVNSAAEFPQ FSHPVHLAVS
RHKQGIRENL AALAMSAGIS DPDAVAQGLF ILLEGSFVSG AMGQDMRVFD TARQIAHCWI
QRQEQGV