| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3553 |
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| Symbol | |
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| ID | 5192297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3971196 |
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| End bp | 3972755 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588009 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001268862 |
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| Protein GI | 148548760 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGC TGTATATTCC CTGTGATTCG GTAGCCCGTG CCGTGGGTGC CGATCAGGTT
GCCGATGCCC TGCTGCATGA GGCCGAGCGC CGCCAGTTGC CGCTGGACAT CCAGCGCACC
AGCTCGCGCG GGCTTTACTG GCTGGAGCCG CTGATCGAGT GCGACAGTGC GCAAGGGCGC
CTGGGTTTCG GCCCGATTAC GCCACACGAT GTGCCGTCAC TGCTTGATGC CTTGGCGGGC
GAACCCGGTG GCCACTCGCT GGCACTGGGG CCGGTCGAAG AAATACCCTA TCTCAAGACC
CAGCAACGCT TGCTGTTCGC ACGCGCGGGC ATCACCCGCC CATTGTCACT GGACGACTAT
CGTGCCCATG GCGGTTTCGC AGGCCTTGAG GCCGCCGTGG CGCTGGACGG TGCCGAAGTG
GTTGCCGCAG TACTCGACTC CGGCCTGCGT GGCCGGGGTG GTGCGGCGTT CCCGGCCGGC
ATCAAGTGGC GCACCGTGCG TGACGCTGGC GCCGGGCAGA AGTACGTGGT GTGCAACGCC
GACGAGGGTG ACTCGGGCAC GTTCGCTGAT CGCATGCTGA TGGAGGGCGA CCCCTTCCTG
CTGATCGAGG GCATGATCAT TGCCGGCCTT GCCGTGGGGG CCGACAAGGG CTACGTCTAT
GTGCGCTCGG AGTACCCCGA CGCCATCCGG GTACTTGACC AGGCCTTCGC CATCGCGCGT
GACGCTGGCT ACCTGGGTGC TGACGTAGCC GGCAGCGGCC AGGCGTTCGA CCTGGAGGTG
CGGGTGGGCG CCGGCGCCTA TATTTGCGGC GAAGAAACCG CGCTGCTCGA ATCCATCGAA
GGCAAGCGTG GCATTGTCCG CGCCAAGCCA CCGCTGCCTG CGCTGCAAGG GTTGTTCGGC
CTGCCGACGT TGGTGCACAA CGTGCTTACG CTGGCTTCGG TGCCCATCAT TCTGGCCAAG
GGTGCGGCGT TCTATCGCGA TTTCGGCATG GGCCGCTCGC TGGGCACCAT GCCGTTCCAG
CTGGCCGGCA ACATTCGCCA GGGTGGCCTG GTCGAGCGCG CGTTCGGCCT GACCCTGCGC
GAGCTGGTGG AAGGCTATGG CGGTGGCACG GCCAGTGGCC GGCCGCTGAA GGCCGCGCAG
GTCGGTGGCC CGCTTGGTGC CTGGGTACCC CCCAGCCATT TCGACACCCC ATTGGACTAT
GAAGCGTTTG CTGCCGTGGG CGCGATGCTC GGCCACGGCG GTGTGGTGGT GGCCGACGAT
ACGTTGAACA TGGCCAGCAT GGCGCGTTTC GCCCTGCAGT TCTGTGCCGA GGAGTCCTGC
GGCAAGTGCA CCCCGTGCCG CATCGGCTCC ACCCGGGGCA TGGAAGTGGT CGACCGGTTG
ATCGCCAGCA GCGACATCAC CGAACGCCAT GACCAGGCGC TGTTGCTGCG CGACCTGTGC
GACACCCTGC AGTACGGTTC GTTGTGCGCC ATGGGCGGTA TGACTGCCTA TCCGGTGGCC
AGCGCGCTCA AGTACTTCCC CGCCGATTTT GGGCTGACCA CCACGGAGGC CGCACAGTGA
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| Protein sequence | MLKLYIPCDS VARAVGADQV ADALLHEAER RQLPLDIQRT SSRGLYWLEP LIECDSAQGR
LGFGPITPHD VPSLLDALAG EPGGHSLALG PVEEIPYLKT QQRLLFARAG ITRPLSLDDY
RAHGGFAGLE AAVALDGAEV VAAVLDSGLR GRGGAAFPAG IKWRTVRDAG AGQKYVVCNA
DEGDSGTFAD RMLMEGDPFL LIEGMIIAGL AVGADKGYVY VRSEYPDAIR VLDQAFAIAR
DAGYLGADVA GSGQAFDLEV RVGAGAYICG EETALLESIE GKRGIVRAKP PLPALQGLFG
LPTLVHNVLT LASVPIILAK GAAFYRDFGM GRSLGTMPFQ LAGNIRQGGL VERAFGLTLR
ELVEGYGGGT ASGRPLKAAQ VGGPLGAWVP PSHFDTPLDY EAFAAVGAML GHGGVVVADD
TLNMASMARF ALQFCAEESC GKCTPCRIGS TRGMEVVDRL IASSDITERH DQALLLRDLC
DTLQYGSLCA MGGMTAYPVA SALKYFPADF GLTTTEAAQ
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