Gene Pput_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3503 
Symbol 
ID5193956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3918682 
End bp3919800 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content62% 
IMG OID640587960 
Producthypothetical protein 
Protein accessionYP_001268813 
Protein GI148548711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.749528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.240509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC CCAGTGCCAT CGAACCGAAA GCCGGCGTGG TGTTGCTTGA CACCCGCGAC 
CACACGCCGG AACACGAGCA CGGCGTTCAT CTCAAGCTTG CCGAAGGCCT GGCACGTTTG
CTGGGCTGCC CACTTATACA GCCCATGCGG CCGCCAGATG CTGCCGATGC CTACTATTAT
CTGCCAACCG AGACCCTGAT CGACCCCAGG CGATATGCCG CCTTGGGTAT TTGCAGCGAA
CAGGACCTAT TTGGCGGCAT GGTGCCGCAC CCCTACATGG CAACCAAGGC GATCTCTCAC
CCGTTACCCG CCGAGGCCAG CTTCCCGCCG GGCTGGACCG ACGCCTTTGC CCGACAGGCC
AGCGATGCCC TGCTGCGCGG CTACACCGTG TTCAGCAAAG CCGACGCTCG CACTGCCGCA
CAGTTGCTGC TGCTCGACGG CCCGCTGAGG GTCAAACCGG TACTGGCTTG CGCAGGACGT
GGGCAACAGG TCATCACCAC TGCAGACGCC CTGGAGCCTC TGCTGGCCGG TATGGATGAC
CAAACGTTGG CGCTGTGGGG CCTGGTGCTC GAAGAAGACC TGAGCCAGGT GCAAACCTTC
AGCGTCGGCC AGGTGCGCGT CGCCGGCTTG ACCTGCAGCT ACTATGGCAC CCAGCAACTG
ACACGTGACC ATCAGGGCAC CGAGGTCTAC GGCGGTTCTG ACCTGGTGGT GGTACGTGGC
GACTATCAGG CGTTGCTACA GCTCCCACTG GAAGACCACC TGCGCCTTGC CATCAACCAG
GCCATGGTTT ACGAACAAGC CGCCGAGCAA CACTTCCCGG GCTTTGTCGC CTCTCGTCGC
AACTATGACA TCGCCCGCGG CACCAGCCCT TCGGGCCATC TGTGCAGCGG GGTGCTCGAA
CAATCCTGGC GCCTGGGTGG TGCCAGCACT GCCGAACTGT TGGCCCTGCA GGCATTTGCC
GATGACCCCG CATTGCAACG GGTGCGTGCC TCCACCCACG AAGTATTCGG CAACCCCGAC
CTGCCCACTG ACGCCACCCT CTTTTACCAA GGAAACGACA GTGAACTCGG ACAACTCAGT
AAATTTGCGC GGATTCGCGA ACATGGCCAT TCAGAGTGA
 
Protein sequence
MTMPSAIEPK AGVVLLDTRD HTPEHEHGVH LKLAEGLARL LGCPLIQPMR PPDAADAYYY 
LPTETLIDPR RYAALGICSE QDLFGGMVPH PYMATKAISH PLPAEASFPP GWTDAFARQA
SDALLRGYTV FSKADARTAA QLLLLDGPLR VKPVLACAGR GQQVITTADA LEPLLAGMDD
QTLALWGLVL EEDLSQVQTF SVGQVRVAGL TCSYYGTQQL TRDHQGTEVY GGSDLVVVRG
DYQALLQLPL EDHLRLAINQ AMVYEQAAEQ HFPGFVASRR NYDIARGTSP SGHLCSGVLE
QSWRLGGAST AELLALQAFA DDPALQRVRA STHEVFGNPD LPTDATLFYQ GNDSELGQLS
KFARIREHGH SE