| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3445 |
|---|
| Symbol | |
|---|
| ID | 5193866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3849848 |
|---|
| End bp | 3850897 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640587893 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_001268755 |
|---|
| Protein GI | 148548653 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00422056 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00254132 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGTGGGGTT TTTACCTGAG CGAGGGGGTT GCGCGCGAAT GGACTGCCCA GCGCTACGTA
ACCTGTGTAA AAAGAGTGCT GACCCTTTAC CTGGAGATTG GCATGCATTC GCACCCCCCT
CGCATCGGCA TCATCGGCAG TGGCGCCATC GGCGGCTTTT ATGGGTTGAT GCTGGCCCGG
GCCGGTTTCG ATGTGCATTT TCTGTTGCGC AGCGAGTACC AGGCCGTTTG TGAACGCGGG
CTGAGCCTGG ACAGTGCCGT GCATGGCGCA CTGCACATGC GGGTGCAGGC TTACGTCAGT
GCCGCCGCCA TGCCGCCCTG TGACTGGCTT CTGATCGGGG CCAAGGCCAC CAGCAACGAG
CAGTTGGCAC CGTTGATCGT CCAGGCTGCT GCGCCCGGCG CCAAGGTGGT GCTGTTGCAG
AACGGCCTGG GTGTCGAGGA GCAGTTGCGT CCGGCCTTGC GCAGCGACAT GCACCTGCTC
GGCGGCCTGT GCTTCATCTG CGTCAACCGC CAGGCGCCAG GTGTAATCCG CCACCAGGCG
CTGGGGGCGG TCAACCTGGG GTATCACAGC GGGCCGGCCA CCGATTGCGG TATTGCGCTG
GTGAATGAAG GCGCCGGGTT GTTCCAGGCG GCGGGGATCG ACTCGCAGGC CATGCCGAAC
CTGGCCTTGG CGCGTTGGCA GAAGCTGGTG TGGAACGTGC CTTACAACGG GCTGTCGGTG
CTGCTGGGGG CCAGCACTTC GCCACTGATG GCCGACAGCA ATAGCCGCGA GCTGATACAG
GCCTTGATGG CCGAGGTAGT GCAGGGGGCG GCAGCCTGTG GCCATGTACT GCCCGAGGGC
TATGCCGAGC ACTTGTTCCA GGTGACCGAG CGCATGCCCG ACTACTGGCC GAGCATGTAT
CACGACCATG TCCACAAACG CCCGTTGGAG CTGGGGGCCA TTTACGCCGA GCCGCTGGCA
CGCGCACGGG CGGCAGGCTG CAGCATGCCG CGCATAGAAA TGCTGTACCA AGCGCTGAGT
TTTATCGACA GCAGCAACCG GCCTACCTGA
|
|---|
| Protein sequence | MWGFYLSEGV AREWTAQRYV TCVKRVLTLY LEIGMHSHPP RIGIIGSGAI GGFYGLMLAR
AGFDVHFLLR SEYQAVCERG LSLDSAVHGA LHMRVQAYVS AAAMPPCDWL LIGAKATSNE
QLAPLIVQAA APGAKVVLLQ NGLGVEEQLR PALRSDMHLL GGLCFICVNR QAPGVIRHQA
LGAVNLGYHS GPATDCGIAL VNEGAGLFQA AGIDSQAMPN LALARWQKLV WNVPYNGLSV
LLGASTSPLM ADSNSRELIQ ALMAEVVQGA AACGHVLPEG YAEHLFQVTE RMPDYWPSMY
HDHVHKRPLE LGAIYAEPLA RARAAGCSMP RIEMLYQALS FIDSSNRPT
|
|---|
| |