| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3341 |
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| Symbol | |
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| ID | 5190588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3764003 |
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| End bp | 3766390 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587788 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001268651 |
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| Protein GI | 148548549 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.679688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAA CGCCGTTGAA AATACTGATG GTCGAAGACA GCTCGATGGA CGCCGAGCTG
ACCCTGATGC GCCTGGAGCG CAGCGGGCTG CATGTTCAGT CACAGCTGGT GTTCGACCAT
GCAGGTGTCG AACATGCCCT GCGCCAGGCC CGCTACGACC TGATCTTGTG TGACTGCGTG
CTACCAGGCT CATCCGGCAC CGAAGTGCTG GCCATCGCCC AACGCCTGGC ACCCGACATC
CCGTTCATAT TCCTGTCCGG CATTTATGGC GAAGAGCACG CGGTGGAAAT GATCCGCCTG
GGCGCGACCG ACTATGTGCT GAAGAAGAAC CTGCCACTGC TGCCCAAAGC CGTGCGCCGA
GCCCTGAGCG AAGTGCAGGA ACGCCAACGC CGTCGCCGCG CCGAAGAGGC CCTGGCGGAC
GTCGAAGCAC GTGCTCGCAT TGCCATCGAC GCCGCCGGCA TGGGCACCTG GGACCTGCGC
CCGCAAGAGG GCCTGTTGCT GTGGGATGAC CGCTGCAAGA CCTTGTTCGG CGTGCCCACC
AGCACCGAAA TGAGCCTTGA AGTGTTCTAC GCCGGCATCT ACCCCGATGA CCTGCCACTG
GTGCGCGAGG CAGTGGAACA TGCCATGCGC CCGGAAAGCG GCGGTCATTA CCGCGTGGAG
TTTCGGATCG CGCAACCCAA TGGCCTGGAG CCTCGCTGGT TGCTGAGCAG CGGCCAGAGC
CAGTTCGTCG ATGATCAGTG CGTTCGCTTT TCAGGCGTAC TGCAGGACAT CCACACGCAA
CGCCAGGCCA CCCAGGCGCT GCGTCAGCTG AACGAGATGC TTGGCGAGCG GGTTGAGCGC
CGTACCCGCG AACGCGATCG TGCCTGGGAG CTGTCGCAAG ACTTGCTGGC CGTGCTGAAC
AAAGACCTGA CCCCGGTCGC ACTGAACCCC GCCTGGGAAG CCAGCCTGGG CTTCTCGCGC
GAACGCCTGA GCCAGTCCTC CTTGCTGCAC CTGCTGCCTG AGCACGACCA GGAACAGTTA
CTCACCGAAC TGGCCGCCCT CTCCCACGGC CGCACCAGCG CACGCTTTGT CGGCCGCATC
CTGCATGCCG GCGGCCAACA GCGCTGGCTG TCGTGGGTGG TGGTGCCGGA GGACACCCTG
CTGTACGTGG TGGCACGCGA CATCACCAGC GAGCGCGAAG CCGCCCTGGG CCTGGCAGAT
GCCAACGCCC GGCTGCGCGA ACAGATCAAC GAGCGCGAGC GCATCGAGGC CGCTCTGCAG
CAGATGCAGC GGCTGGAGGC GGTTGGGCAA CTGACGGCTG GCGTGGCGCA TGACTTCAAT
AACCTGCTGA CGGTGATACT CACCGGTGCC AGCTTTCTGG AGCGCGACCT GGCCAAGGCC
GACCTGGACA AGGCCCGCAC TCGCCTCACC CATATCCGCG AAGCGGGCGA GCGTGGTGCC
AAGCTGACCT CGCAGTTGCT GGCCTTCTCC CGCCGCCAGC GCCTGGAGCC GGTGCCGCTG
AACCTCAACC GTACCCTGGC CGGCCTGGAA GAGCTGCTGC GCCGCACGCT GGGTGGCAAC
GTTTCGGTGC GTCTGGACCT GGACCTGGCC CTGTGGCAGG CACTGACCGA CCCCACCCAG
ACCGAGATGA TCATCCTCAA CCTGGCGATC AATGCCCGCG ATGCCATGCC CGACGGCGGT
CAGCTGACCC TGACAACGCG CAACACCCAC ATCGACCAGC GCCCGCAACG TCCGGAAGAC
CCAGACCCGG GCGAGTACGT GATGCTGAGC ATCCGCGATA CCGGTTGCGG CATGAGCGAA
GACGTGCTGG CCAAGGTATT CGAGCCTTTC TTTACCACCA AGGACATTGG CAAAGGTTCG
GGCCTGGGCC TGGCCCAGGT GTTCGGCTTT GCCAAGCAGT CCGGTGGCGG CGTGCGCATC
GACACCATAC TCGGTCGCGG TACCGAGGTG GCGGTATACC TGCCGGCGGT AAAAGAGGAG
ATGGTGAACG AACCCGTAGC AGCAGTGCTC AGTCAGTCAA TCAGCGAAAG CGGCCATAAC
CGCACGGTGC TGCTGGTGGA CGACGACCAC CTGGTGCGCG ACATGCTTGG CGATGTGTTA
CGCCAATACG GCTACCAGGT GCGCCAGGCG CACAGCGGCG AGCAGGCATT GGCATTGCTG
GATGACGATA TTGACCTGCT GCTGACTGAT TTCGCCATGC CCGAGTTCAA TGGTGCACAA
CTGGCGCTGG CTGCCCGCGA ACGGTACCCC CGCGTGCCGG TGGTGTTCCT GACCGGTTAT
GCGGAGTTGC AGGGGCTGGA ACTGCCGGGC AGCCTGGTGA TCCAGAAGCC GGTGCAGGCT
GATGAACTGG CCAGGGCGCT GAACGAAATG CTGGGGATTT CCGGGTAA
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| Protein sequence | MQQTPLKILM VEDSSMDAEL TLMRLERSGL HVQSQLVFDH AGVEHALRQA RYDLILCDCV
LPGSSGTEVL AIAQRLAPDI PFIFLSGIYG EEHAVEMIRL GATDYVLKKN LPLLPKAVRR
ALSEVQERQR RRRAEEALAD VEARARIAID AAGMGTWDLR PQEGLLLWDD RCKTLFGVPT
STEMSLEVFY AGIYPDDLPL VREAVEHAMR PESGGHYRVE FRIAQPNGLE PRWLLSSGQS
QFVDDQCVRF SGVLQDIHTQ RQATQALRQL NEMLGERVER RTRERDRAWE LSQDLLAVLN
KDLTPVALNP AWEASLGFSR ERLSQSSLLH LLPEHDQEQL LTELAALSHG RTSARFVGRI
LHAGGQQRWL SWVVVPEDTL LYVVARDITS EREAALGLAD ANARLREQIN ERERIEAALQ
QMQRLEAVGQ LTAGVAHDFN NLLTVILTGA SFLERDLAKA DLDKARTRLT HIREAGERGA
KLTSQLLAFS RRQRLEPVPL NLNRTLAGLE ELLRRTLGGN VSVRLDLDLA LWQALTDPTQ
TEMIILNLAI NARDAMPDGG QLTLTTRNTH IDQRPQRPED PDPGEYVMLS IRDTGCGMSE
DVLAKVFEPF FTTKDIGKGS GLGLAQVFGF AKQSGGGVRI DTILGRGTEV AVYLPAVKEE
MVNEPVAAVL SQSISESGHN RTVLLVDDDH LVRDMLGDVL RQYGYQVRQA HSGEQALALL
DDDIDLLLTD FAMPEFNGAQ LALAARERYP RVPVVFLTGY AELQGLELPG SLVIQKPVQA
DELARALNEM LGISG
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