| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3333 |
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| Symbol | |
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| ID | 5195000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3755622 |
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| End bp | 3758015 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587780 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001268643 |
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| Protein GI | 148548541 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGCA GGGGCCAAGG AGGACCCGGC AATGGTTGGA AACCGTGTGT GAAGTGGCTC
CCGGCGACGA CGTGCCGCTG GTGCCTGGGG CTGGCCATGG TCAGCCCCGC GCTGGTGCTG
GCCGACGACT TGCCCCCACC GCCCACGGAG ATGTCCGCCA TCGCCGAGGC CACCCTTTAC
CTCGACCTGG TGGTGAACCA GATGCCCAGG GTTGAACTGA TACCGGTGCA GCAGCGGGCC
GGGCGGTTGT ACCTGGACAG CGAACTATTG CGTGCAGCCG GCGTTTCGCT GCCGGGCAAC
CCCCAGGGGG AGGTGGCCCT GGACAGCATT GCGGGGCTGC ATACCGATTA CGACAGTCAG
AACCAGCGCC TGCTGCTGCA GGTGCCGCCG GCCTGGTTGC CTGACCAGCA AGTGGGTGAT
CGCAACCTTT ACCCGGCCAG TGATGCGCGC AGCAGTTTTG GTGCCTTGTT CAACTACGAC
CTGTATCTCA ACGACACCGA TGAAGGCGGC ACCTACCTGG CTGCCTGGAA CGAGCTGCGG
CTGTTCGACA GCTGGGGTAC CTTTTCCAGC ACCGGGCAGT GGCGTCAGTC TTTCAATGGC
GCACAGGCGG ACGATACGCG CCGAGGTTTC ATGCGTTACG ACACCACCTG GCGCTTTACC
GACGAGCAGC GCCTGCTGAC CTACGAAGCC GGTGACTTCG TGACGGGTGC GTTGCCCTGG
AGCAGTTCGG TGCGAGTGGG TGGGGTGCAG CTGTCACGCG ACTTCGCGGC GCGTCCTGAT
CTTGTCACTT ACCCGTTGCC TGCGTTCGCC GGTGAAGCGG CGGTGCCGAC GTCGCTTGAC
CTGTTCATCA ACGGTTTCAA GTCCAGTACC ACCGAACTGC AGCCAGGCCC ATACACCCTG
ACCAACGTGC CGTTCATCAA CGGTGCCGGG GAGGCGGTGG TGGTCACCAC GGATGCCCTT
GGCCGGCAGG TGTCGACCAC CTTGCCGTTC TATGTCACCA GCAGCCTGCT GCAGAAGGGC
CTGTCGGACT ACTCGGTTGC CGCCGGCAGC CTGCGCCGTG ATTACGGTGT ACGCGATTTC
AGCTATGGGC CGGGTATCGC CTCGGGCAGC CTGCGCTATG GGCTCAGTGA CATCTTCACC
CTGGAAACCC ACGCCGAAAC GGCTGAGTCG CTGATGCTGG GTGGGCTGGG CGGCAACATG
CGCGTGGGCA ACTTCGGCGT GATCAACGCT GCCTTGGCGC AAAGCCGGTT CGATGGCGAC
AAGGGCCACC AGGTCGCCCT TGGCTACCAA TACAACAGCC AGCGCATCGG CTTCGGTTAC
CAGCGCCTGC AACGCCACGG CGACTATGCC GACCTGAGCC GGGTGGACTC CCCGGACATG
CAACTGAGCA AAAGCAGCGA ACAGGTTACC CTCAGTGTCA ACCTGAACGC GTACGGCAGC
ATTGGCGCTG GTTACTTCGA CGTGCGCGCC GGTGACGGTA CGCGTACCCG GTTGATCAAC
CTGAGCTACA GCAAGCCGCT GTGGGGCAGC AGCAGTGTGT ACCTGTCGGC CAACCGTGAA
GTGGGGGACA GCCAGTGGGC GGTGCAGGCG CAGCTGGTGA TCCCGTTCGA CCTGCACGGC
ACCCTGGCGC TGAGCATGGA ACGCAGCAAT GAAGGCGAGA CCCTGCAACG GGTCAACTAC
AGCCGTGCGG TGCCAGCGGG TGTCGGCGTC GGTTACAACC TTGGGTATGC CGCAGGCAGC
GACCGTGATG CCTATCGCCA GGCCGACGTT ACCTGGCGCC TGCAATCGGT GCAATTGCAG
GCCGGTGTGT ATGGCAGCAG CGGCGAGATG ACCCGCTGGG CCGACGCCAG TGGTTCTCTG
GTGTGGATGG ATGCCGGCGT GTTCGCCGCC AACCGTATCG ATGATGCCTT CGTGGTGGTC
AGTACCGCAG GTTACGCGGA TGTGCCGGTG CGTTATGAAA ACCAGGAAAT CGGCCGTACC
GATGCCAAGG GGCACTTGCT GGTGCCTTAC AGCAGCGGTT ACTACCGGGG TAAGTACGAG
ATCGATCCCA TGAACCTACC ACCGGATGTC CTCGCGCCGG ACGTTGAGCA GCGTGTGGCG
GTACGACGGG GCAGTGGCTA CTTGCTGGAA TTCCCCCTCA AGCGCGTCAT GGCGGCCAGT
GTTGAATTGG TGGATGGCAA TCAGCAGGTG CTCAAACTGG GTAGCCGTGT TACCCACGCA
GAGAGTGGCA CCCAGGCGGT GGTGGGGTGG GACGGGTTGG TGTACCTGGA GAACCTGTCG
TTGCATAACC GCCTTGAGGT GGCGCTTGAA GGGGGTGGGC ATTGCGAAGT GGCGTTCGAC
CTGCCTGACG CGCAAGGCTC GGTCCCTTTG ATTGGTCCGT TGGTGTGCCG ATGA
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| Protein sequence | MKCRGQGGPG NGWKPCVKWL PATTCRWCLG LAMVSPALVL ADDLPPPPTE MSAIAEATLY
LDLVVNQMPR VELIPVQQRA GRLYLDSELL RAAGVSLPGN PQGEVALDSI AGLHTDYDSQ
NQRLLLQVPP AWLPDQQVGD RNLYPASDAR SSFGALFNYD LYLNDTDEGG TYLAAWNELR
LFDSWGTFSS TGQWRQSFNG AQADDTRRGF MRYDTTWRFT DEQRLLTYEA GDFVTGALPW
SSSVRVGGVQ LSRDFAARPD LVTYPLPAFA GEAAVPTSLD LFINGFKSST TELQPGPYTL
TNVPFINGAG EAVVVTTDAL GRQVSTTLPF YVTSSLLQKG LSDYSVAAGS LRRDYGVRDF
SYGPGIASGS LRYGLSDIFT LETHAETAES LMLGGLGGNM RVGNFGVINA ALAQSRFDGD
KGHQVALGYQ YNSQRIGFGY QRLQRHGDYA DLSRVDSPDM QLSKSSEQVT LSVNLNAYGS
IGAGYFDVRA GDGTRTRLIN LSYSKPLWGS SSVYLSANRE VGDSQWAVQA QLVIPFDLHG
TLALSMERSN EGETLQRVNY SRAVPAGVGV GYNLGYAAGS DRDAYRQADV TWRLQSVQLQ
AGVYGSSGEM TRWADASGSL VWMDAGVFAA NRIDDAFVVV STAGYADVPV RYENQEIGRT
DAKGHLLVPY SSGYYRGKYE IDPMNLPPDV LAPDVEQRVA VRRGSGYLLE FPLKRVMAAS
VELVDGNQQV LKLGSRVTHA ESGTQAVVGW DGLVYLENLS LHNRLEVALE GGGHCEVAFD
LPDAQGSVPL IGPLVCR
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