| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3306 |
|---|
| Symbol | |
|---|
| ID | 5195522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3723767 |
|---|
| End bp | 3724555 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640587753 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268616 |
|---|
| Protein GI | 148548514 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3403] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.22084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0803287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACGG GATATGGAAA TTGCTATCGC CTGGATGCGC TGGAGCTCGC CGCTGAACAT
GGACACACCA TGCAACACTG GACGTTCAAA ACCATAGAAC ACTTTCGCAG TATTCTCGCC
AACCCCGAAT TCCCCTGCCT GTTCGGCCGC AAGGCGGTAA ACGGCGAAAC CTGCCACATT
CTCTTCGCCC GCGCCGAGCA ACTGGCCGAT GATATCGCAC AGGGCCTGGC CAATTATGTG
CGCACCGTCG CACCGATCGC GCCCAAGCAG CGCATCGGCA GCCCATTGGT GGTGTTTCTC
GAAACCGCCG CCGGCAGCAG CCTGGCCGAG CAACAGGCCT TGGCCTGGAA GGTACTGCGC
GGCGTGCATG CGCGCGACCC GCACCCTTGG CCGCAGGGCA TCCCGACCGA TCCGGACGAT
ACCGGCTGGT CGTTCTGCTA TGCCGGCATG CCGCTGTTCA TCAACATGAA CTTCCCCGGC
CATCAGCAGA TGAAAAGCCG CAATCTGGGC CAGCACATCA CCTTCGTCAT CAACCCGCGG
GAGAACTTCG ACGAAGTGGC CAATGCCAAC ACCGAGAGTG GCAAGCGCAT CCGCGAGCGC
ATTCGCGAGC GCGTGCACCA CTACAACGAC GGCGTTGTGC CCGACACCCT TGGCTTTTTC
GGCGATACCG ACAACTACGA GTGGAAGCAG TATCAACTGC AGGAGGCAGG CTCGCTCAAC
CCGTCACGCT GCCCCTTCCA CGCCCATGCC GCACACCAGC CGACACCCGA CATACTGATC
GAGAACTGA
|
|---|
| Protein sequence | MFTGYGNCYR LDALELAAEH GHTMQHWTFK TIEHFRSILA NPEFPCLFGR KAVNGETCHI
LFARAEQLAD DIAQGLANYV RTVAPIAPKQ RIGSPLVVFL ETAAGSSLAE QQALAWKVLR
GVHARDPHPW PQGIPTDPDD TGWSFCYAGM PLFINMNFPG HQQMKSRNLG QHITFVINPR
ENFDEVANAN TESGKRIRER IRERVHHYND GVVPDTLGFF GDTDNYEWKQ YQLQEAGSLN
PSRCPFHAHA AHQPTPDILI EN
|
|---|
| |