| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3288 |
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| Symbol | |
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| ID | 5195468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3700158 |
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| End bp | 3700616 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587735 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_001268598 |
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| Protein GI | 148548496 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.796587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCA TGAAGCCCCT TATTCTCGTG CTCAACGGCC CCAACCTGAA CATGCTGGGC
ACCCGCGAGC CTGCCCAGTA CGGCCACGAA ACCCTCGCTG ACCTGGCTCA GGGATGTGCC
GACACTGCCC ACGCCCACGG CCTGGAAATC GAATTCCGCC AGACCAACCA CGAAGGTGAA
CTGATCGACT GGATCCACGC CGCCCGTGGC CGCTGCGCCG GCATCGTGAT CAACCCCGGC
GCCTGGACGC ACACCTCGGT CGCCATCCGC GATGCCCTGG TGGCCAGCGA ACTGCCGGTG
ATCGAGGTGC ACCTGTCCAA TGTGCACAAA CGCGAGCCGT TCCGTCACTT GTCGTTCGTA
TCGTCCATCG CCGTCGGTGT CATCTGCGGC CTGGGCAGCC ACGGCTACCG CATGGCGCTG
AGCCACTTCG CCGAGCTGTT GCAGGAGCGT GCGGCATGA
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| Protein sequence | MPVMKPLILV LNGPNLNMLG TREPAQYGHE TLADLAQGCA DTAHAHGLEI EFRQTNHEGE
LIDWIHAARG RCAGIVINPG AWTHTSVAIR DALVASELPV IEVHLSNVHK REPFRHLSFV
SSIAVGVICG LGSHGYRMAL SHFAELLQER AA
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