Gene Pput_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3261 
Symbol 
ID5194095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3669955 
End bp3670392 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID640587708 
ProductRES domain-containing protein 
Protein accessionYP_001268571 
Protein GI148548469 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.145024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.45407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTTGT GGCGAATCAG CGCCTATGCA GACTTGAGCG GTACGGGGGG CTTGCGTGTA 
AGTGGCCGCT GGCACCAGGC GGGTCGGCCG GTGGTGTATG CCGCCACCAG CCCTCCCGGG
GCGATGCTGG AAGTGTTGGT GCACCTGGAG ATCGACCCCG AGGATTTCCC GACCACCATG
CGCTTGCTTC GCATCGAACT GCCCGACACG GTTTCCCAGG CGCAGTTGCC CGCTTTGCAG
CCCGGCTGGT CTGCTCAGCC TGAGTTGACC CGTACGCTGG GCAATCGTTT TCTGGATGAC
GGTTCGGCAT TGCTGCTGCC GGTGCCAAGC GCGATCATGC CCAGCACCAC CAATTACCTG
TTCAACCCAC GGCACCCGCA GGCGCAGAGC GCGAAAATCC AGGTTGAGGA TTTCACGCCG
GACAGCCGCC TGTTCTAG
 
Protein sequence
MILWRISAYA DLSGTGGLRV SGRWHQAGRP VVYAATSPPG AMLEVLVHLE IDPEDFPTTM 
RLLRIELPDT VSQAQLPALQ PGWSAQPELT RTLGNRFLDD GSALLLPVPS AIMPSTTNYL
FNPRHPQAQS AKIQVEDFTP DSRLF