| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3235 |
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| Symbol | |
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| ID | 5193156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3644699 |
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| End bp | 3646252 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587680 |
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| Product | ABC transporter related |
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| Protein accession | YP_001268545 |
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| Protein GI | 148548443 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.157816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAT CGGCCAATGA AGTGGTGCTT GCCGCCAGCG GCCTGGGCAA GACCTACGCC
CAGCCCGTGC TCGGCGAGGT CAGCCTGAGC CTGCGCGCCG GTGAAGTGCT GGCCCTGACC
GGCGAGAACG GCGCGGGCAA GAGTACGTTG TCCAAGCTCA TCAGCGGCCT GGAGGTGCCC
ACCACCGGGC ACATGACCTA CCGTGGCCAG GCCTACGCGC CCGGCAGCCG CAGCGAGGCC
GAACGCCTTG GTGTGCGCAT GGTCATGCAG GAGCTGAACC TGCTGCCGAC GCTGACCGTG
GCGGAAAACC TGTTTCTCGA CAACCTGCCC AGCCGTTTCG GCTGGATCAG CCACAAGCGC
CTGCGCCAGC TGGCAACGGC CGCCATGGCT CGGGTCGGGC TCGACGCCAT CGACCCGGAC
ACCCCTGTCG GCGAGCTGGG CATCGGCCAT CAGCAAATGG TCGAGATTGC CCGCAACCTG
ATCGGTGACT GCCATGTGCT GATCTTGGAT GAACCCACTG CCATGCTCAC TGCGCGCGAG
GTGACGTTGC TGTTCACCCA GATCGAGCGC CTGCGCGCGC GCGGCGTGGC CATCGTCTAT
ATCTCGCATC GCCTGGAAGA GTTGCAGCGG GTGGCCCAAC GCATCGTTGT GCTGCGCGAT
GGCAAGCTGG TGTGCGACGA GCCGATCCAG CGCTACAGCA GCGCCGAGCT GGTCAACCTG
ATGGTCGGCC GCGAGCTGGG CGAGCATATC GACCTTGGCC GACGGCAGAT GGGTGCACCG
CTGCTCAAGG TCGACAAGTT GTGCCGCGGC GACAAGGTGC GCGAGGTGTC GTTCGAAGTC
AGGGCAGGGG AGATTTTTGG CATTTCCGGC CTGATCGGCG CCGGCCGTAC CGAGCTGTTG
CGCCTGATCT ACGGTGCCGA TCGCGCCGAC AGCGGCGGTA TCGCGCTCGG CCAACCGCCG
CAGGCGGTAA ACATCGACTC GCCCAAGGCT GCAGTGCGGG CCGGTATCGC GCTGATAACC
GAAGACCGCA AAGGCGAGGG CCTGCTGTTG ACGCAGTCGA TCAGCGCCAA CATTGCATTG
GGCAACCTGG GCGCGGTATC GCGGGCCGGC GTGCTCGATG GCGAAGCGGA AAAAGCCTTG
GCCGAACGCC AGATCCAGGC CATGCGCATT CGCAGTGCCG GCGCGCAGCA GGTGGTGGGT
GAGCTGTCTG GCGGTAACCA GCAAAAAGTG GTGATCGGCC GCTGGCTGGA GCGCGATTGC
CAGGTGCTGC TGTTCGACGA ACCCACGCGT GGCATCGATG TGGGCGCCAA GTTCGACATT
TATGGCCTGC TGGCCGAGCT GGCGCGCCAA GGCAAGGCCT TGGTGGTGGT GTCCAGTGAC
CTGCGAGAAC TGATGCTGAT TTGCGACCGC ATCGGCGTGC TGTCCGCCGG TCGCCTGATC
GACACCTTCG CGCGTGATCA TTGGAGCCAG GACCAGTTGC TTGCCGCCGC CTTCGCCGGT
TATCAGAAAC GTGACGCGCT GCTGCATGAT GCAGCCCCCA GGATGGATGC ATGA
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| Protein sequence | MPASANEVVL AASGLGKTYA QPVLGEVSLS LRAGEVLALT GENGAGKSTL SKLISGLEVP
TTGHMTYRGQ AYAPGSRSEA ERLGVRMVMQ ELNLLPTLTV AENLFLDNLP SRFGWISHKR
LRQLATAAMA RVGLDAIDPD TPVGELGIGH QQMVEIARNL IGDCHVLILD EPTAMLTARE
VTLLFTQIER LRARGVAIVY ISHRLEELQR VAQRIVVLRD GKLVCDEPIQ RYSSAELVNL
MVGRELGEHI DLGRRQMGAP LLKVDKLCRG DKVREVSFEV RAGEIFGISG LIGAGRTELL
RLIYGADRAD SGGIALGQPP QAVNIDSPKA AVRAGIALIT EDRKGEGLLL TQSISANIAL
GNLGAVSRAG VLDGEAEKAL AERQIQAMRI RSAGAQQVVG ELSGGNQQKV VIGRWLERDC
QVLLFDEPTR GIDVGAKFDI YGLLAELARQ GKALVVVSSD LRELMLICDR IGVLSAGRLI
DTFARDHWSQ DQLLAAAFAG YQKRDALLHD AAPRMDA
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