| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3185 |
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| Symbol | |
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| ID | 5194622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3599279 |
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| End bp | 3600961 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587629 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001268495 |
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| Protein GI | 148548393 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.214251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.510937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG CCGCAGACCT CATTATTCAC AATGCCCGCA TCTACACGGT CGACCCGCAC
AGGCCTTGGG CTGAGGCGGT GGCCATCTGC GGCGAACGCA TCGTTTGCGT GGGCGACCAC
GGCAGCGTCA TGGCATACGC CGGCCCTGCC ACACGCCTGC TGGATGCCGG CGGCAAACTG
GTGCTGCCGG GCTTCGTCGA GTCTCACTGG CATTTTTCCT GTACCGCCTT TGCCTTTCAG
GCGCTGGTCA ACCATACCGA CCCGCTACAG GTGCTGGCCC TGCTCCAGGC CTACGTCGAG
GCCAACCCCT GTGAAAAAGC CATTACCGGC ATGGGCTGGA TCCAGCCATT GATGCCTGGG
CATATGTTGC GCCGCGAAGT ACTGGATGCC ATCTGTGCGG ACAAGCCCGT GTGCCTGCTG
TCCACCGACT ATCACACCAT GTGGGTCAAC AGCTTCGCCC TGAACGCTGC CGGCATCGAC
CGCAACACCC CGCCAGTAGA AGAGGGCGCC AGCTGGTTCG AAAAGGACCC GATCACCGGC
GAGCCCACGG GTGTGATCAT TGACTGCGCC GCCTATTCGC TGCTGATGCA ACGTCTGAGC
GAAGCCGGCT ACCTACCGAC AGGCATCGAC CTGTACCTGC GCTCGATTCC TTTTTGGCAA
GAGAAACTGG TGGCGGCCGG GATTACCACG GTATTCGATG CCGGGTTCCT CGACCCCGCT
GGCGACCAGT CGCTGCTGTA TGAAACCCTG CAGCAACTGG AGCGTGAGGA GCGCCTGAAA
CTGCGGGTGG TCGGCAGCTA CATCAACATG GGCACCGAGG ACGATCCGGT CACGCGGCTG
CAGGCCATGC GCGAACGCTA CGACTCGCCG CTGGTCAAGG CGCAGACCCT CAAGCTGATG
CTGGACGGGA CCGAGCTGAA CCACACCGCG TTCCTGCTCG AGCCCTATTG CGACAAGCCA
CACAGCTGCG GGTCGACGAC CATGCCCGAG GAAGTGTTCG AGGGCCATGT GCGCAAGGCC
GACGCCCTCG GTATCGACGT GATGGTGCAT GCAGTGGGCG ATGCCGCCGT GCGCATGGCG
CTGGACGTGT TCGAGCGCAC GTTCTCCAGC AATCCGCCCC GCGACCGTCG TCACGTCATC
ACTCACGCCT TTCTCACCCA CCCCGACGAC ATACCGCGCT TTCGCCGTAT CGGCGTCATG
GCCAACACCC AGTTGCAGTG GGGCGTGGTC GACGCCTACG CCGAGGCCAT CCAGCAGACC
TATGGCTACC CACGCTGGGC GTCGATGTAT AAATTCCGCA GCTTCATCGA CCAAGGTGTG
ACCGTGTCCA TCGGCATGGA CGGCCTGGTG TGCCAATGCC GATGCCAGCA CAAGCCGGTG
GAACACTTCG AATCGGGCCA CACCCGCCAG CTCAGTGGCG AACCCGATGC CCCTGTGATG
CCCGATGCCG ACGAGCGCCT GAGTATCCCG CAACTGATCG CCGCCTATAC CCTCAACGGT
GCATACCAAC TGGGCCTGGA ACGGGAAATC GGTTCGATCA CCGTTGGCAA GCGTGCCGAC
ATCATCGTGC TGGAGCAGGA CCTGTTCGAA CTGGACCGCT ACCAGATCGG CAATACCGAA
GTAGCGCTGA CCGTAATGAA CGGCCGCATC ACCCACGACG CAGGTACCCT GCCCCGCGCC
TGA
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| Protein sequence | MSTAADLIIH NARIYTVDPH RPWAEAVAIC GERIVCVGDH GSVMAYAGPA TRLLDAGGKL
VLPGFVESHW HFSCTAFAFQ ALVNHTDPLQ VLALLQAYVE ANPCEKAITG MGWIQPLMPG
HMLRREVLDA ICADKPVCLL STDYHTMWVN SFALNAAGID RNTPPVEEGA SWFEKDPITG
EPTGVIIDCA AYSLLMQRLS EAGYLPTGID LYLRSIPFWQ EKLVAAGITT VFDAGFLDPA
GDQSLLYETL QQLEREERLK LRVVGSYINM GTEDDPVTRL QAMRERYDSP LVKAQTLKLM
LDGTELNHTA FLLEPYCDKP HSCGSTTMPE EVFEGHVRKA DALGIDVMVH AVGDAAVRMA
LDVFERTFSS NPPRDRRHVI THAFLTHPDD IPRFRRIGVM ANTQLQWGVV DAYAEAIQQT
YGYPRWASMY KFRSFIDQGV TVSIGMDGLV CQCRCQHKPV EHFESGHTRQ LSGEPDAPVM
PDADERLSIP QLIAAYTLNG AYQLGLEREI GSITVGKRAD IIVLEQDLFE LDRYQIGNTE
VALTVMNGRI THDAGTLPRA
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