Gene Pput_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3134 
Symbol 
ID5192007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3530513 
End bp3531103 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID640587580 
Productheme oxygenase 
Protein accessionYP_001268446 
Protein GI148548344 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3230] Heme oxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG TAACTTCCCC CTTCACCGAA CCAAGCCGCT GCAAACGCCT GAAAGCGGCC 
AGCAGCAGGG ATCATGACAG CGTCGATCAA TTGGTAATGG CAGCGCGGCC CTTCGAGAAC
CGCGAGCGTT ATGGTCGCTT CCTGCAGGTG CAGCACCGCT TTCATGGCAG CCTGCTGGCG
TTGTATCAGG ATGAACAGCT CAACCAGCAA CTGCCGGGGC TGGCGACGCT GTCACGTTTC
GCGGCAGTCG AGGCCGACCT GCGCGACCTG GGCCTGCCGC TGCCAGCGCC CCCCCAACCG
GTCTGTGTCA GCTCGGCCCA GGCCTTGGGA TGGCTGTATT GCAGTGAAGG CTCGAACCTG
GGGGCGGCGT TTCTCTACAA GCACACGCAA TGTCTTGGGC TGGAGGGTGA CAAGGGCGCC
CGCCACCTAG CCCCTCACCC GGATGGCCGA GCGCTGCATT GGCGCGCATT TGTTGCCAGG
CTGGACAGCC TGGTGCTGGG GGATCAGGAA GAAGCAGAGG TGGTGAAAGG GGCGATTGCT
GCGTTCGACA GTTACCGGCG GCATTTGCGT GAGGTGTTTG CAGGCCTATG A
 
Protein sequence
MTAVTSPFTE PSRCKRLKAA SSRDHDSVDQ LVMAARPFEN RERYGRFLQV QHRFHGSLLA 
LYQDEQLNQQ LPGLATLSRF AAVEADLRDL GLPLPAPPQP VCVSSAQALG WLYCSEGSNL
GAAFLYKHTQ CLGLEGDKGA RHLAPHPDGR ALHWRAFVAR LDSLVLGDQE EAEVVKGAIA
AFDSYRRHLR EVFAGL