Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3113 |
Symbol | |
ID | 5190548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3501368 |
End bp | 3504358 |
Gene Length | 2991 bp |
Protein Length | 996 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587559 |
Product | hypothetical protein |
Protein accession | YP_001268425 |
Protein GI | 148548323 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATG CCTCCGTCAG CAGCGCCACC TCCGGCCCTG CCTGCAGCGC ACGCGTGCCC ATCCTGCCGG TGCGCTACGC CATCGTACCC CGCACCGGCG ACGCCCCCGC CTGCCGCTAT GCCGATGCAG GCTTCAACCT GGAACAAGGC TTCGCCCCGC TGCAGCACTC GGCCTACACC CTCCGCGCTG TGCGCCCAGG CTATGTCTAC GTGTTCATGA AAGGCCCTCT GGGCGAAAAA CTGGTCATTC ATGAGCACGT CGGCGCGGGC CTCTACAAGG AGCTGCGCTA CCAAGGGCTG GAGGACTACC ACCGCCGTGA GCGCTACCTG TCCGGCCAGA GCACGGGCTG GGTGTGGGCC GACACCTGCC AGGACACGGC CAAGGAAGTG TGGATCGGCT ACAGCCCGCA CCTGTGGACC AACGCCATCA CCGCCCGTAT CACCGGTTCG GCAGCCCTGC GCAAACGGCA CATGCGCCAG CTGGACATGG CCGAGCTGGT GAGCGGCAAC CCGGCGCCGT CCACCCAGCC CCATGTGTTG CCGGTCAGTG CCCTGCAAAC CTGGGTCGAA GACTTCAAGC CAACCGAGCG GCGCATGCCG CTGACCTGGA GCAGCGACCC GGTCATCGAA ACCTTGCCCA TCGGCAACCT CAATGCCATC GCCCGCCACT ACCCCTGGAC CCAGCCGAAA GTGCCAGTGG TGGTGGCGCT CGCCGACGCC GAAGGCATGG CCCTGGACCT GAGCCTGTCG GTCTCGGCCT ACCAGCATCA ACTGCGTGAC CTGATGCCCG CCGAGCAACT GGAACACACA AAACCCGCCC AACCTCCCGA GCAGGAGCGC GTGCCAGCGT GTTACCGGCT GGATGCCGAA CAGCTCAGCC CGCAGAGCCG CGACTTTCAC CATCGCAACC TGGTCGCCAT GCTGCTGAAC AAGACGCTGG AAAGCCTGTA CCCGGCGGAC GCACCTTCAC CGGAACTGGC CGCGTTCAGG CTGGGCACGT CACGCCGGGG GCCTGCCCTG TCGCCGGCCG AGTCCCATTT CCAGGCCCTC ACCCATGAAG ATTACTCCCC TAATGGCGCG CGCCTGGCAC AGCGCCTCGA TGTCGACAAA TACCGGCGCT TCCTCGCCGA ACGCGACGCG CTGGAACGGC GGATTGCCGC CCTGCGCAAC CTGGCCTTGC AAGCCAGCAA CGATCATGAC GCCTGGCTGG CGACGGCCGA ATCCCAACAC ATTGATAACC CCTACAGCCT GGCTGCGGCA CTGGCCTGTT ACGACCGCGA CGAACGCACC TCCGCCCGCG GTCTGGAAAT TTCACTGGCG TTGCTGATCC ACCCGATGGG CCAGCCGACA CCCGGCACCG AAGATCATGA CCGGCGTTTC AAACGCCTGG AGCAATGGCT GGACCAGCAC GACAGCCCGC TTTACACCGC CTTGGCGCCG TTCAACCCGT TCAAGGACAA AGCCGATTCG ATCGGCTCTT TGTTCGGCGC CAGCGACAAC GTGATCGAAG GGCTGGCTGG TCGCTTCCCG GCCATGGCGG ACATCACTGA CCTCACCGCC CAGTCGGTCA ATACCGTGGT GCTCAAGCGC CTGCGTGGCC AAACCCGTTG GGATGCCAGC CATGGCCTGC GGCGGCAAGT GTTGCTGGCA GCGCGTGAGG CCAATGCCGA GAAAGCGCTG GGGTTGTTGG CGGCGCGCTA TCGAATCACC GAGCAGGCCA TTACCGAAAA TCCCTTTAGC CAGGAGGTGC AGCGGTATTT GAAGAGCGGC ATGGCGCAGG TTGAAGAGAT GAAAGCGTTG CGCATTTCGG GTAGCCGCAC GGTGTCCATC GAGCTGACCA CCACTGCGCG CGTGAAACCT AACTTCCTTG GGTTGCTCAC TTCCGGCGGT GGGGGTGGTT TAAACGCGGG GATGCTGTGG TTCAACATCT TATCGCTCAA GACGGCTTAC AACAGCCTGC AAAAGAGCGA TGCACCGGAA TATACCCTGG GGTTAGCTTC ATCTGTTTTC GGGGTGATCG GGGCAGCGGC AGCGACGTTG GTCAGCGTAC GGGCAACGCA AAAGGCCGTC ATGCTGAGAT TAAGTGCCAC AGCGCCGGGT ATGGCCTTTG GCAATGGGGT TATCAAGTTT TTGAGTAGCA ATCTGTTTGC GCGTTTAGCC GGTTACCCGG CGATTGCATT TAGCCTATTT TCTGACCTAT CTAAGGGAAT GCGCCAACTC GACAGTGGTA ATTCAACTGC AGGCGGATAC ACCTTGGCCG GCGGGGTAAC GATGGCTACT GGCTCTGTTG TTGCCCTTGA AGCAGGACTT GCAGTTGCGG GCGTGACATC CATTGTTCCC TTCGCTGGAT GGGCAGCAGC TGCACTTGTA CTCGTAGGTA TTGCAATCAT TGCAGGGGGG CTCTGCCTAC ATGCCAAGGC ACAGGAACAT CTTCACAGCC CTATTGAACT TTGGGCAGCA CGTAGCATCT TCGGCAATCG TATTAACGAT GGAGAAATCC GCATTGAAAT CATCTTGGAC CATGAAAAAA AACTGCCTGC ATTCCCATCG CTGCATGCAG AAATCAAAGC TTGGCATGAT GAGAATTTTG GACCAAAGCT AATTTCAGCT GAGCAAGCCC TTACACTCGG CATAACCAAA GTCGATACAA GATGGAATCA AAACAATCAC TGGTCTCCGC CAAACTGGAC AGCTATCACA CATAACGAAG TAGGCACATT TCAACCAACC GTTGAGTTCA CAGTCCTGCT ACCTGGCTTC AGGTTAGGCG TAAGCAAATG GTCAGGAAGC TTGAGCTCCC TCCATGATGA TCAAAGAATG GACGTATTCC CAATTGCCCC GACCGGCCAC ATCGTAGGTG CTGGCCTGGT TCTGCATTTC GAGAACACGC TTACCAACCA AGAACATATC TCACTGCATC TAGCTTACAG CGCCAATCAA GGCCTGGACG AAGACAATGA GACCCTGTCA ATTTTTCGTC TGGAGCGCTG A
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Protein sequence | MTNASVSSAT SGPACSARVP ILPVRYAIVP RTGDAPACRY ADAGFNLEQG FAPLQHSAYT LRAVRPGYVY VFMKGPLGEK LVIHEHVGAG LYKELRYQGL EDYHRRERYL SGQSTGWVWA DTCQDTAKEV WIGYSPHLWT NAITARITGS AALRKRHMRQ LDMAELVSGN PAPSTQPHVL PVSALQTWVE DFKPTERRMP LTWSSDPVIE TLPIGNLNAI ARHYPWTQPK VPVVVALADA EGMALDLSLS VSAYQHQLRD LMPAEQLEHT KPAQPPEQER VPACYRLDAE QLSPQSRDFH HRNLVAMLLN KTLESLYPAD APSPELAAFR LGTSRRGPAL SPAESHFQAL THEDYSPNGA RLAQRLDVDK YRRFLAERDA LERRIAALRN LALQASNDHD AWLATAESQH IDNPYSLAAA LACYDRDERT SARGLEISLA LLIHPMGQPT PGTEDHDRRF KRLEQWLDQH DSPLYTALAP FNPFKDKADS IGSLFGASDN VIEGLAGRFP AMADITDLTA QSVNTVVLKR LRGQTRWDAS HGLRRQVLLA AREANAEKAL GLLAARYRIT EQAITENPFS QEVQRYLKSG MAQVEEMKAL RISGSRTVSI ELTTTARVKP NFLGLLTSGG GGGLNAGMLW FNILSLKTAY NSLQKSDAPE YTLGLASSVF GVIGAAAATL VSVRATQKAV MLRLSATAPG MAFGNGVIKF LSSNLFARLA GYPAIAFSLF SDLSKGMRQL DSGNSTAGGY TLAGGVTMAT GSVVALEAGL AVAGVTSIVP FAGWAAAALV LVGIAIIAGG LCLHAKAQEH LHSPIELWAA RSIFGNRIND GEIRIEIILD HEKKLPAFPS LHAEIKAWHD ENFGPKLISA EQALTLGITK VDTRWNQNNH WSPPNWTAIT HNEVGTFQPT VEFTVLLPGF RLGVSKWSGS LSSLHDDQRM DVFPIAPTGH IVGAGLVLHF ENTLTNQEHI SLHLAYSANQ GLDEDNETLS IFRLER
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