Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3107 |
Symbol | |
ID | 5194362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3494943 |
End bp | 3495707 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587553 |
Product | hypothetical protein |
Protein accession | YP_001268419 |
Protein GI | 148548317 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4335] DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG ACCGAAAGTC CCTGATCGAC CTTGGCCAAC TGCCAACCCG CAACCTGGCC GAATGCCTGG CGGTGGATCA AGCCGCATTG GTCAACGCCT TGACAGGCCA ACTGCCAGCA GCATTGGTTG AGCACCTCGC TGCCAGTGCG GACCAGGTCC AGGCACTGGG CCTGTCAAAA AAAGTGGCGG CCATTGGCCT GGCGCTGGGC AAGTGGCTGG AGCAAGCCGC CGAGTCGTTG CGCCAGCACG TGTTCGAGCA ATGCTGCACG CACCCGTCCG ATACCGTGCG CAGTTGGGCA GCGTTCGCCC AGGCGTACCT GTCACGCTCG CAGCCTGCGG AAAATGCCCT GCTGGCGCAG TTTCGCTTCG CCCGCGATGA GCACTTCGGC GTGCGTGAAT GGGCATGGAT TGCCCTGCGC CCGCGCCTGG CCCAGCATCT TGAAGCGGCC CTGGCGCTAC TCGGCCGCCA TACCGGCGAT GCAGACCCGC TGGTACGTCG GTTCTGCATC GAGATCCTGC GCCCGCGCGG CGTTTGGTGC GAGCACATTG CCACGCTCAA GCAACAACCA GAAGTGGCCG AGCCGTTGCT GGTACCGCTG CTGGCCGAAG CTGAGAAATA CGCCCAGGAC TCAGTCGCCA ATTGGCTCAA CGATGCCAGC AAGACCCGCC CCGACTGGGT ACTTCAGCTG TTTCAGCGCC ATCCCCCGGC CTGCAAGGCC TCACAGCGCA TCCAGACCCG GGCTACCCGA AGCCTGCGGC AGTGA
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Protein sequence | MSDDRKSLID LGQLPTRNLA ECLAVDQAAL VNALTGQLPA ALVEHLAASA DQVQALGLSK KVAAIGLALG KWLEQAAESL RQHVFEQCCT HPSDTVRSWA AFAQAYLSRS QPAENALLAQ FRFARDEHFG VREWAWIALR PRLAQHLEAA LALLGRHTGD ADPLVRRFCI EILRPRGVWC EHIATLKQQP EVAEPLLVPL LAEAEKYAQD SVANWLNDAS KTRPDWVLQL FQRHPPACKA SQRIQTRATR SLRQ
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