Gene Pput_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3107 
Symbol 
ID5194362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3494943 
End bp3495707 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID640587553 
Producthypothetical protein 
Protein accessionYP_001268419 
Protein GI148548317 
COG category[L] Replication, recombination and repair 
COG ID[COG4335] DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACCGAAAGTC CCTGATCGAC CTTGGCCAAC TGCCAACCCG CAACCTGGCC 
GAATGCCTGG CGGTGGATCA AGCCGCATTG GTCAACGCCT TGACAGGCCA ACTGCCAGCA
GCATTGGTTG AGCACCTCGC TGCCAGTGCG GACCAGGTCC AGGCACTGGG CCTGTCAAAA
AAAGTGGCGG CCATTGGCCT GGCGCTGGGC AAGTGGCTGG AGCAAGCCGC CGAGTCGTTG
CGCCAGCACG TGTTCGAGCA ATGCTGCACG CACCCGTCCG ATACCGTGCG CAGTTGGGCA
GCGTTCGCCC AGGCGTACCT GTCACGCTCG CAGCCTGCGG AAAATGCCCT GCTGGCGCAG
TTTCGCTTCG CCCGCGATGA GCACTTCGGC GTGCGTGAAT GGGCATGGAT TGCCCTGCGC
CCGCGCCTGG CCCAGCATCT TGAAGCGGCC CTGGCGCTAC TCGGCCGCCA TACCGGCGAT
GCAGACCCGC TGGTACGTCG GTTCTGCATC GAGATCCTGC GCCCGCGCGG CGTTTGGTGC
GAGCACATTG CCACGCTCAA GCAACAACCA GAAGTGGCCG AGCCGTTGCT GGTACCGCTG
CTGGCCGAAG CTGAGAAATA CGCCCAGGAC TCAGTCGCCA ATTGGCTCAA CGATGCCAGC
AAGACCCGCC CCGACTGGGT ACTTCAGCTG TTTCAGCGCC ATCCCCCGGC CTGCAAGGCC
TCACAGCGCA TCCAGACCCG GGCTACCCGA AGCCTGCGGC AGTGA
 
Protein sequence
MSDDRKSLID LGQLPTRNLA ECLAVDQAAL VNALTGQLPA ALVEHLAASA DQVQALGLSK 
KVAAIGLALG KWLEQAAESL RQHVFEQCCT HPSDTVRSWA AFAQAYLSRS QPAENALLAQ
FRFARDEHFG VREWAWIALR PRLAQHLEAA LALLGRHTGD ADPLVRRFCI EILRPRGVWC
EHIATLKQQP EVAEPLLVPL LAEAEKYAQD SVANWLNDAS KTRPDWVLQL FQRHPPACKA
SQRIQTRATR SLRQ