| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3071 |
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| Symbol | |
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| ID | 5194234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3455073 |
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| End bp | 3456011 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587517 |
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| Product | DNA-binding transcriptional regulator DsdC |
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| Protein accession | YP_001268383 |
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| Protein GI | 148548281 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02036] D-serine deaminase transcriptional activator |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0441412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC CCGGCGGCGG CGCCGTGAAA CTCAATGGCT CGCACCTGGG CAGCCTGCAT
GTCTTTCTGG TGGCGGCACG CCACTTGAGC TTCTCGCGCG CCGCCGATGA GCTGTGCCTG
ACGGCCAGTG CCGTGAGTCA CCGCATCAAT CGCCTGGAAG ATGAGCTGGC GCTCAAGCTG
TTCCACCGCA TGCCGCGCAA GGTCAGCCTC ACCGAAGACG GCGAGCGCCT GTTCGCGGTC
ATGCAACGGA CCATGGATGA GTTAAGCGAG GCCGTGCAGG AACGTGCTCA CGCCGAAATC
GCCGGCCAGT TGACGTTGTA TGTGCGCCCG TCAGTCGCAC AATGCTGGCT GGTGCCGCGG
CTGGCGCAGT TCACCGCCCG CTACCCTGAT ATCCAGCTGG ATATCAGGGT GGGCAACGAG
GGCATCGATT ACCGCACCCG CAAGATCGAC CTGGTCCTGT GTTATTCGGA TGGCCATCAC
CCGGGGTTGC AGAGCATCCA CTTGATGGAC GAGCGGATCG CCCCGGTGTG CTCCCCCCGT
TACGCAGAAA CCCATGCATT GACCGGTGAC CTGCACCCGC TGGATCATTG CACCGCCTTG
CATGACGTAG CGGCCTGGGA CAACGCTGCA TTCGATGCAG AATGGCAGCT CTGGGCCAAC
ACCACAGGTG CGGGTATCAG CCTCCCGCGC CGATTCCTCA CATTCGATCG CTCCGACCTG
TGCACGCTCG CCGCGCTGAA TCACGTAGGC ATCGCCATTG GCCGCGAACA GCTGGTCAAG
GATCGCATTG CACGAGGTGA GCTGGTTTTG CCGTTCGGTG GTTTCGTCGA CACCCCCAAC
CATGGCTATT ACCTGGTCTA CCCGCACCAT GACCCGATGC CCAAACGCCT GCAGGTGTTG
ATCGACTGGC TCGTGAAAGA AGCCTGCACT GACCTGTAG
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| Protein sequence | MKKPGGGAVK LNGSHLGSLH VFLVAARHLS FSRAADELCL TASAVSHRIN RLEDELALKL
FHRMPRKVSL TEDGERLFAV MQRTMDELSE AVQERAHAEI AGQLTLYVRP SVAQCWLVPR
LAQFTARYPD IQLDIRVGNE GIDYRTRKID LVLCYSDGHH PGLQSIHLMD ERIAPVCSPR
YAETHALTGD LHPLDHCTAL HDVAAWDNAA FDAEWQLWAN TTGAGISLPR RFLTFDRSDL
CTLAALNHVG IAIGREQLVK DRIARGELVL PFGGFVDTPN HGYYLVYPHH DPMPKRLQVL
IDWLVKEACT DL
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