| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3040 |
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| Symbol | |
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| ID | 5195186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3424275 |
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| End bp | 3424916 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587486 |
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| Product | hypothetical protein |
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| Protein accession | YP_001268352 |
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| Protein GI | 148548250 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.338752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC TGTTCATTGC CAGCTTGCTG GCATTTGCAC CCTTCACCTG GGCATTGGAC
CAGGCAGGCA GCCAGCGCCT GAGTGATCTG CAGCAGCGCT GGGCGCAGAT TCAGTACCAA
ATGCCCAAGG ACAAGCGTGC CGACGCTTTC GAAAAGCTGG CCGGCGAAGC AACAACGTTT
GTTCGTCAGT ATCCCGGCAC ACCTGAACCC TTGATCTGGG AGGGCATCAT CAACAGCAGT
TGGGCGGGGG CGACGGGTGG CCTCGGTGCA CTGGGCAAGG TCAAGGCGGC GAAAGCCAGC
CTGGAGCAGG CCATGAAGCT GGACCCCAAC GCTCTGCAAG GTTCGGCCTA CACCAGCCTG
GGCACGCTGT ATGATCAGGT GCCCGGCTGG CCTATCGGTT TCGGTGATGC CGAAATGGCC
GACAAGATGC TGCGCAAAGC CCTGCAGATC AACCCCAACG GTATCGACAG CAACTATTTC
TGGGCTGATC ATCTGTATCG GCAAAAGCGC TACCCTGAAG CTACCGCAGC CCTGCAGAAA
GCCTTGCAGG CACCGCCCCG GCCGGGGCGT GAGTTGGCTG ACCAGGGCCG GCGTGCCGAT
ATCGATGCTT TACTCAAGGC CATCAAGGAC AAACAGGACT GA
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| Protein sequence | MKRLFIASLL AFAPFTWALD QAGSQRLSDL QQRWAQIQYQ MPKDKRADAF EKLAGEATTF
VRQYPGTPEP LIWEGIINSS WAGATGGLGA LGKVKAAKAS LEQAMKLDPN ALQGSAYTSL
GTLYDQVPGW PIGFGDAEMA DKMLRKALQI NPNGIDSNYF WADHLYRQKR YPEATAALQK
ALQAPPRPGR ELADQGRRAD IDALLKAIKD KQD
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