| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3001 |
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| Symbol | |
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| ID | 5191128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3390860 |
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| End bp | 3392194 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587447 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001268313 |
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| Protein GI | 148548211 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.137427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCAA CGCTGAAACG CAGTGTCGCC GCCTTTGGCC TGGCGCTCGC GAGCTACGCC
GCGATGCCGT CGGCGGCCCA GGCGGCCAAT GAACAATTCT TCCCGCTAGC CACCTACCGA
GTCGGTGCCT ATGCCTCCAG CGGCATTCCG GTGTGGGCCG GGATGATCGA CTACCTGCGC
TACATCAACG ACGTCGAAGG CGGCATCAAT GGCGTCAAGC TGGTCTGGCA GGAGTGTGAG
ACCGAGTGGA CGGCGGAGAA GGGCATCGAG TGCTACGAGC GCTTCAAGAA CGGCCTCAAT
GGCGCTCCGG TAGCGGTCTA CCAGCCCAAT GGTGCGCCGG CTGCCTATGC CCTGGCGGAC
AAGGCCGAGG CCGACCGGAT CCCGCTGATC ACCCTCGGCT ATGGTCGAAC CGAGGCCACC
GATGGCCGCG TCTTTCCCTA CAACTTCCCG GTGATGCTGA CCTTCTACAG CGAGGCTTCT
GCATTCATCA ACTACGTGGC CGAGCGCGAG GGTGGGCTGG ACAAGCTCAA GGGCAAGAAG
ATCGCCACCG TCTACCACGA CTCCGCCTAT GGCCGGGAAA CCCAGGGGCC GCTGAAGCTG
CTGGCGGAGA AGTACGGCTT CGAGAACATC CAGATTCCCG TCGCCGACCC GGGTAACGAG
CAGGCCTCGC AGTGGCGCCA GGTGCGCCAG CTCAAGCCGG ACTGGGTATT CCTGCGCACC
TGGGGCGTGT CCACCCCGGT GGCGATCAAG ACTGCGGCGC GCTTCGGCTT TCCGGTCGAT
CGCATCGTTG GCGACATCTG GGCCAGCTCC AATGAAGACG TGCTGCCGGC CGGCGAGGCG
GGCAAGGGAT ATCTGGCCCT GACGCCCTAT CCGGGCGGTG CCGACTTCGA CATCCACCAG
CGCATCAAGG CACACATCCT CGACAAGGGC AAGAGCGACC TCAAGGATCC GAAGAGCTTC
GGCAGCGTCT ACTACAACTC CGGCTTGGTG AATGCCGCCA TCGCCGTCGA GGCGATCCGC
GCCGCGCAGA AGCACTTCGG ACCGCGGCCG CTCAATGGCG AGGAAGGTCG CTGGGGCTTG
GAACACCTCG ATCTCGACGA TGCGCGGCTC AAGGCGATCG GTTTCCTGGG GCTGATGCAG
CCGCTGAAGC TGTCGTGCAG CGACCACGAG GGGGGCGGTG CCGTCAAGGT GCAGCAGTGG
GATGGCCAGC AGTGGAAGCT GATCACCGAT TGGGTGCAGG CCGATCATGT CACCCTGCGC
CCCCTGATTG ACGCCAAGGC TGCCGAGTAC GCGAAAGAGA AAGGCGTGAC CCCCCGTGCG
TGTGACGCGC CGTGA
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| Protein sequence | MHATLKRSVA AFGLALASYA AMPSAAQAAN EQFFPLATYR VGAYASSGIP VWAGMIDYLR
YINDVEGGIN GVKLVWQECE TEWTAEKGIE CYERFKNGLN GAPVAVYQPN GAPAAYALAD
KAEADRIPLI TLGYGRTEAT DGRVFPYNFP VMLTFYSEAS AFINYVAERE GGLDKLKGKK
IATVYHDSAY GRETQGPLKL LAEKYGFENI QIPVADPGNE QASQWRQVRQ LKPDWVFLRT
WGVSTPVAIK TAARFGFPVD RIVGDIWASS NEDVLPAGEA GKGYLALTPY PGGADFDIHQ
RIKAHILDKG KSDLKDPKSF GSVYYNSGLV NAAIAVEAIR AAQKHFGPRP LNGEEGRWGL
EHLDLDDARL KAIGFLGLMQ PLKLSCSDHE GGGAVKVQQW DGQQWKLITD WVQADHVTLR
PLIDAKAAEY AKEKGVTPRA CDAP
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