| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2973 |
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| Symbol | |
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| ID | 5193813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3359804 |
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| End bp | 3362674 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587419 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001268285 |
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| Protein GI | 148548183 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTATC GCGATTTCGT TCGGCCCAAA TTCGTCGGCC TGCTCCAGGC ACTGGGCCTT
GAGTGTCAAT TTGAGCGCGC CCTCGGTAGC CAGTTGTTCT ACCGCAACCC CAAGGGCGAC
ATGGTCGCGG TCACCGACTT TCTCGGCGGT TACGGTGCGG CACTGTTCGG CCACAACGAC
CCACAGTTTG TCGATCAGCT ATGTGCGCTG CTGCGCAGCG ACGTGCCGTT CAACGCACAA
ATGTCGATCC GCGGTGCGGC CGGGCAATTG GGGCGAGCGC TCAGCGACGC CTTCAATCGC
GAACTGAAGA ACACCGAACG TTATGTTTCG ACTTTCTCCA ACAGTGGCGC GGAGGCGGTG
GAAATCGCCG TCAAGCACGC GGAGTTCCGT CGCCAGAAGA GCCTGCAAAA GCAGTTCGAC
GACATCGATT TCACCCTGGC CAGCCTGACC GCCAGCGAAC ACGCTTACCG CGAACTGGAG
GTGGCCGACC TCGACCTGCC TGCAGGTGTC CTGCCGACCA CCCTGAACAG CGTGACCTTG
CGTCAGGTGG TTGAAGCCGT TCGCCAACAC AACCTGGCGC AGTTGCACAT CGAACCGGTA
TTCGTCGCCC TGCGCGGCAG CTTCCACGGC AAATTGGTCA ATACCGTGCA ACTGACCTAT
GGCCGTCAGT ACCGCGCGCC GTTTGCCCGT TTTGGGCTGA ACGTCGAGTT CATCGACCCA
CAGCAGCCCC ATCAGTTGCA GGCATTGCCG GCCCGGCACA CGCACCATTG GTTGAGCCTG
CAATGGGACG GCGAACACCT GCACGTGCTG CAATTGCCGT TCAGTGCGAT TACCGCCGTG
TTGATGGAAC CGATTCAGGG CGAAGGCGGT ATCAACGAGT TCGCGGCCGA TTTCTATCTG
GGGCTGCGCA AGCTGTGTAA CGAGCAACAA TGCCCGCTGG TGGTCGATGA AGTGCAGTCG
GGTTTTGGTC GCGCCGGGAC GTTTCTTGCC AGCAGCCAGT TCAACCTGCA AGGCGACTAC
TACTGCCTGT CCAAGGCACT CGGCGGCGGC TTGATGAAAA TCGCCGCGAC GGTGATCCGC
AGCAGCCACT ACGAAGGCGA GTTCAGCTAT ATCCACAGCT CGACCTTCGC CGAGGACGAT
CCGTCCTGCC ATATCGCGCT GTCGGCATTG CGCCGGTTGT TCGCCAATGA CGACGCGATG
CTCAAAGACA TACGCACCAA GGGCGCCTAC CTCAAAGCCT CGCTCAATGA ACTGAAGATG
GCCTATCCGG ATGTGATCGC CGATGTGCGC GGGCGTGGCT TGCTGGTGGG TCTGGAATTG
CACGACTTGA GTGTCAGCAG TTCGCTGGTA CAGGCGTCGG CCCAGTACAA CGATGCCTTG
GGTTACTTGA TTGCCGGTTA CCTGTTGCAA TTCGAAGCGT TGCGGGTAGC ACCTTCGGGC
AGCAACTCCA ACGTGATTCG CCTGGAGCCG CCAGCCTGTA TCACCCTGGG CGAAATCGAC
GGGCTGATCG CTGCCCTGCA ACGGGTCTGC GACATGCTGC GCCGTGGCGA TGCGTTGCCG
TTGGCGGCGG GTATCTGCGC GGACTCGATG CCCGCCGTGC CAGTCCGTCA GGACGATTTT
CGGGTGGCTG AGCCCGTTGA AAACACCGCT GCCAAGGTCG AAGTCGTCGC TCGGGTAGCG
TTCATCAACC ACCTGATCGA TGCCGATATC CTCGGTGACG TCGATCCCTC GCTGGCAGCC
CTGAGCCCGG AACAAAAACG CACGTTCATC AATCGCACCA AGCCTGAACG CCGCGCTGTG
CCAGTCGGCC CGGTGATCAT TCGGTCGCGC CTCGGCATGG CGGTGGAGTT CACGTTATAC
CCGCTGTGCA TGGATTCGGA TGCCATGGCC GAGTACATCC GCAGCGGTGA CCTGGACAGC
ATTCGCGAAG AAGTCGGCAG GCGTGTCACC GATGCCCGCG CCGATGGCTG CAGCATCGCC
GGCCTCGGGA TGTACACCTC GATCGTCACC AACAATTGTC AGGCGCTGAA GATTGCCGAC
ATGGCGCTGA CGTCCGGCAA CGCCCTGACC ATCGGCATGG GGCTCGAAGC CATCGAGCAA
GGCTGTGTAC AGCAAGGTCT GGCACTGCGC GAGCAAACCG CTGCCGTTGT CGGTGCCGCC
GGTAACGTTG CGTCGACCTA TGCCTCGGTG CTGTCCGCCA CCGTCGATCA CCTGATCCTG
ATTGGCAGCG GTCGTGACGG CTCGGTTCGG CGCCTGGAGA AAACCGCGCA ACAGATCTAC
GCCGACGCGG CCCGTTCGAT CCTCAAAGGC ACGGCCGAAC ACGACCGGTT GGCGCAGCGA
CTGCTGAACC TTGATGGTTT TCGTGGCGTG TTGCACTCAC ATGGCCAAAA AGCCGACCTC
GGTTTGCACA TCGCCCGTCT GGTGGATGAG CGCCTTGGCG CGAACGCCTT CATCACGGTC
ACCAACGATC TCGACGCCAT CAAGGGCGCA CGGATTGTCC TGTGCGCTGC CAATGCGCCT
CAGCCGTTCC TCGGTGCCGA ACATTTTGCC GAGCGCAGCG TGATTTGCGA TATCGCCGTG
CCGCTGAACG TCCATCAAGA CCTGCCGAGC CAACGCGAAG ACGTGCTCTA CATGCACGGC
GGCATCGTCC AGACGCCGTT CGACGACGGC CTGGCGCCCA ACGTGCGGGC CTATCTGAAA
AAAGGTCAGC TGTATGCGTG CATGGCCGAG TCGGTGTTGA TGGGCTTGTC TGGCATGAGC
CAGCACGGCT CCTACGGCGA TATCAGCCGT GAGCAAGTGC AGCAGGTCCG CGCACTGGCC
GCGACACACG GCTTCACCCT CGCGCAATTC AAAACTCAAA ACTCACTGTA A
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| Protein sequence | MDYRDFVRPK FVGLLQALGL ECQFERALGS QLFYRNPKGD MVAVTDFLGG YGAALFGHND
PQFVDQLCAL LRSDVPFNAQ MSIRGAAGQL GRALSDAFNR ELKNTERYVS TFSNSGAEAV
EIAVKHAEFR RQKSLQKQFD DIDFTLASLT ASEHAYRELE VADLDLPAGV LPTTLNSVTL
RQVVEAVRQH NLAQLHIEPV FVALRGSFHG KLVNTVQLTY GRQYRAPFAR FGLNVEFIDP
QQPHQLQALP ARHTHHWLSL QWDGEHLHVL QLPFSAITAV LMEPIQGEGG INEFAADFYL
GLRKLCNEQQ CPLVVDEVQS GFGRAGTFLA SSQFNLQGDY YCLSKALGGG LMKIAATVIR
SSHYEGEFSY IHSSTFAEDD PSCHIALSAL RRLFANDDAM LKDIRTKGAY LKASLNELKM
AYPDVIADVR GRGLLVGLEL HDLSVSSSLV QASAQYNDAL GYLIAGYLLQ FEALRVAPSG
SNSNVIRLEP PACITLGEID GLIAALQRVC DMLRRGDALP LAAGICADSM PAVPVRQDDF
RVAEPVENTA AKVEVVARVA FINHLIDADI LGDVDPSLAA LSPEQKRTFI NRTKPERRAV
PVGPVIIRSR LGMAVEFTLY PLCMDSDAMA EYIRSGDLDS IREEVGRRVT DARADGCSIA
GLGMYTSIVT NNCQALKIAD MALTSGNALT IGMGLEAIEQ GCVQQGLALR EQTAAVVGAA
GNVASTYASV LSATVDHLIL IGSGRDGSVR RLEKTAQQIY ADAARSILKG TAEHDRLAQR
LLNLDGFRGV LHSHGQKADL GLHIARLVDE RLGANAFITV TNDLDAIKGA RIVLCAANAP
QPFLGAEHFA ERSVICDIAV PLNVHQDLPS QREDVLYMHG GIVQTPFDDG LAPNVRAYLK
KGQLYACMAE SVLMGLSGMS QHGSYGDISR EQVQQVRALA ATHGFTLAQF KTQNSL
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