Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2906 |
Symbol | |
ID | 5193023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3297932 |
End bp | 3298594 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640587354 |
Product | dienelactone hydrolase |
Protein accession | YP_001268220 |
Protein GI | 148548118 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.543814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACT GGATTACGAT GGTAACTCCC CACGGCCCCA TGAATGGATG GTCTGCCGAG CCTGACGACA AGCCCGTAGG TGGCGTGGTT CTGGTCCACG AATTCTTCGG CGTCAACGGC GACATGCGTC AAATTGCCGA ACGATATGCC GAGGATGGCT ACCTGACGGT GGTGCCCGCA CTTTTCGATA AAATCCAACG TGAGGTCGAA CTCGGCTACG CCCCAGAGGA CATCCTGCTA GGCAGCAGGT TGGCAACTGA GATCGGTCTG GAGACAGCCG CAGAACTGGT TGCGACTACC GTCGACGCGA TAGCTCACGC TGGAAATGTG GCGATCGTGG GCTACGGCTG GGGCGGAGCT GTAGCTCTGC GAGCAGCACA AACGCTATCA GCACCCTGTA TCGTTTATGG CGGTGTACAC GACGTCTTTT GGCCCTGCGA GCAATCGAGC ATTCCGATAC TCGTCCATTC CAGTAACGAT GCCCTTGGTA GAGAGTCCCT TCTCCGCGAA AAAGTGCTGA ATCTGAATGT GCTGACCTAC CCTGTGGAGA GTGGTTTCTA CCGAGTAAGC GATGCGCAGC GCCATCAATC CGAATGCGCA GATTTGGCGT TACGGAAATC ACTGGAGTTT CTACGAGCCC ACATCCGTGG AAAAGCACAC TGA
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Protein sequence | MSHWITMVTP HGPMNGWSAE PDDKPVGGVV LVHEFFGVNG DMRQIAERYA EDGYLTVVPA LFDKIQREVE LGYAPEDILL GSRLATEIGL ETAAELVATT VDAIAHAGNV AIVGYGWGGA VALRAAQTLS APCIVYGGVH DVFWPCEQSS IPILVHSSND ALGRESLLRE KVLNLNVLTY PVESGFYRVS DAQRHQSECA DLALRKSLEF LRAHIRGKAH
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