| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2774 |
|---|
| Symbol | |
|---|
| ID | 5190601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3153206 |
|---|
| End bp | 3155272 |
|---|
| Gene Length | 2067 bp |
|---|
| Protein Length | 688 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640587224 |
|---|
| Product | trehalose synthase |
|---|
| Protein accession | YP_001268090 |
|---|
| Protein GI | 148547988 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02455] trehalose synthase, Pseudomonas stutzeri type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.461538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CCGACCCGTC GTACGTCAAA TGGCTCGAAG ACCGCGCCAT GCTCAAGGCC
TCCCAGGCGC GCGCCAGCCT GTACTCAGGC CAGTCGCGCC TGTGGCAACA ACCGTACGCC
GAGGCCCAGC CCCGCCGCGC CACCGAAATC GCCTCGGTGT GGCTGACCGT CTACCCCGAC
GCCATCATCG CGCCCGAGGG CTGCTCGGTA CTCGGTGCCC TGGCCCACGA AGCGTTGTGG
AAGCGCCTCT CGGAGATCGG CGTACAGGGC CTGCACACGG GCCCGATCAA ACTGTCCGGT
GGCATCCGCG GCCGCGAACT CACCCCCAGT GTGGACGGCA ACTTCGACCG CATCAGCTTC
GACATCGACC CGCTGTACGG CAGCGAGCAG GAACTGATCC AGATGAGCCG CATGGCCGCT
GCGCACAATG CCGTGACCAT CGACGATCTG ATCCCCTCGC ACACCGGCAA GGGCGCCGAC
TTCCGCCTGG CCGAGATCGC CCATGGCCCC TACCCGGGGC TGTACCACAT GGTCGAGATC
CGCGAAGAAG ACTGGACGCT GCTGCCCGAG GTGCCCGCCG GGCGCGATGC GGTCAATTTA
CTGCCAGCTC AGTGTGACGA GCTGAAGGCG CGCCATTACA TCGTTGGCCA ACTGCAGCGG
GTAATCTTCT TCGAGCCGGG CGTGAAGGAA ACCGACTGGA GCGCCACGCC GCCGATCACA
GGCGTCGACG GCAAGACCCG CCGCTGGGTG TACCTGCATT ACTTCAAGGA AGGCCAGCCC
TCGCTGAACT GGCTGGACCC TACCTTCGCC GCCCAACAAA TGATCATTGG TGACGCGTTG
CACGCGCTGG ACTGCCTGGG TGCACGCGGC CTGCGCCTGG ACGCCAACGG CTTTCTCGGC
GTGGAAACCC GCGCCAGCGG CACCGCCTGG TCGGAAAGCC ACCCGCTGTC GCTCGTCGGC
AACCAGCTGA TCGGTGGCAT GATCCGCAAG GCCGGCGGTT TCAGCTTCCA GGAGCTGAAC
CTGACCCTCG ATGACATTGC GCAGATGTCC AGAGGCGGTG CCGACCTGTC CTACGATTTC
ATTACCCGGC CGGCCTACCA GCATGCGCTG CTGACGGGCG ACACCGAGTT CCTGCGCCTG
ATGCTCAAGG AGATGCACGC CTTCGGCATC GACCCGGCCT CGCTGATCCA TGCCCTGCAA
AACCATGACG AGCTGACCGT GGAGCTGGTG CACTTCTGGA CACTGCACGC GCACGACATG
TACCTGTACA AGGGCCAGAC CCTGCCTGGC AGCATCCTAC GCGAACATAT CCGCGAAGAG
ATCTACGAAC GGCTGTCGGG AGAACATGCG CCGTACAACC TGCGCTTCGT GACCAACGGC
ATTGCCTGCA CCACCGCCAG CCTGATCGCC GCTGCACTGG GTATTCGCGA CCTCGAACAG
ATTGGCGCAA CGGATATCGA ATTGATCAAG AAGGTGCACC TGCTGCTGGT CATGTACAAC
GCCATGCAGC CGGGGGTAGT CGCCTTGTCC GGCTGGGACC TGGTCGGTGC CCTGCCCTTG
CCCGCCGAAG CGGTGGCCGA ACGCATGCTC GACGGCGATA CCCGCTGGAT TCACCGAGGC
GGCTATGACC TGGCCGGGCT TGACCCACAG GCGGTGGCTT CGGTGCGTGG CATGCCGCGT
GCCCGGTCGC TTTACGGCAG CCTCGACAGC CAGCTGGACG AGGGTGATTC ATTTGCCTGC
CAGGTGAAGA AACTGCTGGC TGTGCGCCAG GCCTACGGCA TCGCCACCAG CCGTCAGGTG
CTGGTACCTG AGGTACGCAG CCCAGGGCTG CTGGTGATGG TGCATGAGTT GCCAGCCGGG
CGTGGTATCC AGATCACTGC GCTGAACTTC GGCCAGGAGG CAATTGCCGA GGAACTGCTG
TTGACCGGCT TCACACCTGG GCCGGTGGTC GACATGATCA ACGAGACGGT CGAAGGCGAT
TTAACCGAGG ACGGGCGCCT GATGGTGAAC CTGGACCCCT ACGAGGCGCT GTGCCTGCGG
ATCGTCAACA GCAGCGGGCA TGTTTGA
|
|---|
| Protein sequence | MTQPDPSYVK WLEDRAMLKA SQARASLYSG QSRLWQQPYA EAQPRRATEI ASVWLTVYPD
AIIAPEGCSV LGALAHEALW KRLSEIGVQG LHTGPIKLSG GIRGRELTPS VDGNFDRISF
DIDPLYGSEQ ELIQMSRMAA AHNAVTIDDL IPSHTGKGAD FRLAEIAHGP YPGLYHMVEI
REEDWTLLPE VPAGRDAVNL LPAQCDELKA RHYIVGQLQR VIFFEPGVKE TDWSATPPIT
GVDGKTRRWV YLHYFKEGQP SLNWLDPTFA AQQMIIGDAL HALDCLGARG LRLDANGFLG
VETRASGTAW SESHPLSLVG NQLIGGMIRK AGGFSFQELN LTLDDIAQMS RGGADLSYDF
ITRPAYQHAL LTGDTEFLRL MLKEMHAFGI DPASLIHALQ NHDELTVELV HFWTLHAHDM
YLYKGQTLPG SILREHIREE IYERLSGEHA PYNLRFVTNG IACTTASLIA AALGIRDLEQ
IGATDIELIK KVHLLLVMYN AMQPGVVALS GWDLVGALPL PAEAVAERML DGDTRWIHRG
GYDLAGLDPQ AVASVRGMPR ARSLYGSLDS QLDEGDSFAC QVKKLLAVRQ AYGIATSRQV
LVPEVRSPGL LVMVHELPAG RGIQITALNF GQEAIAEELL LTGFTPGPVV DMINETVEGD
LTEDGRLMVN LDPYEALCLR IVNSSGHV
|
|---|
| |