Gene Pput_2742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2742 
Symbol 
ID5191083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3117507 
End bp3118910 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content57% 
IMG OID640587194 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_001268060 
Protein GI148547958 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.759384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC TGACCAATCG CCGGATCCTG CTGATCGATG ACATGCCGAC TATCCACGAG 
GATTTTCGCA AGATCCTTGC CCCGGCCAAA GCGCAGAACA CAGAACTGGA CGAGATGGAA
GGGTTGTTGT TTGGCGAGCA GATCAAGAAC GACCGACCGG TATTCGAACT CGATTCAGCC
TATGGCGGTG AGGAAGGGCT CGGCCTGCTG AAGCGTGCGC TGCAGGCCAG CAAGCCTTAC
GCGTTAGCCT TCGTCGACAT GCGTATGCCA GGTGGATGGG ATGGCGCTCA AACCATTGAG
CACCTGTGGG AAGAGGACCC GCTGTTGCAG GTAGTCGTCT GCACCGCCTA CTCGGACTAT
TCCTGGGATG AGTTGCTCGA CCGGCTGCAG GCCCACGATC GCCTGCTGAT CCTGAAAAAA
CCGTTCGACA ACATCGAGGT CCAGCAAATG GCCAGTACCT TGCTGACCAA GTGGGAAATG
ACCCAACGAG CCTCGCTGAA AATGCACCAG CTCGAACAGC GGGTAGAGCG GCGTACCCAG
CAACTGACCC AGGCCAGCGA GGCGCTGCAG CAGGAGATCG AGGAGCGCAA GCAGCTGGAA
AGCCAGCTGG TGCAATCGGA GAAGCTCGCC TCGTTGGGGC AGATGGCCGC CGGCGTGGCG
CACGAGATCA ACAATCCGAT CGGTTTCGTG TCCTCCAACC TGGGCACTCT GGGAGGGTAC
TTTCAACAAC TGTTAGCGAT GCTCGACGCC TATCGCCAGG CCGAACTGAT GCTCGGCGCA
AACGAAACCA CGGGGCGCTT GCAAAGGCTT CGTGAGCAGA CTGAGCTGGA ATTCCTCATG
GAAGACATCC CGATCCTCAT CAAGGAGTCC AAGGACGGAA TCGGTCGAGT GGCGCATATC
GTCAAGGACC TCAAAGACTT CTCGCGCGTT GACAACGCTC AGCAATGGCA ATTAGCCGAT
TTGCAGCAGG GCATTGACTC CACGCTCAAC ATCGTCGCGA GCGAGCTGAA ACATAAAGCC
GACGTGGTAA AACGTTACCA GCCGTTACCC CCTGTCGAAT GCCTGCCGTC GCAGATCAAC
CAAGTGATAA TGAACCTTGT GCTCAATGCC GTCCAAGCCA TGGGCCCCGA GCGGGGCACC
ATCACATTGG GCACTGTTCA TCAAGGCGAC TGGGTGTGCA TCGACGTTGC GGATACAGGC
GCTGGGATAG CACCGGAGAA CATCAAGAAA ATCTTCGATC CTTTTTTCAC CACCAAGCCC
GTCGGCCAAG GAACCGGGCT AGGCCTGTCC CTTTCCTACG GCATTGTAAA GAAACACGGT
GGAGAGATAT CCGTATCAAG CCAGGTCGGA GTGGGAACAA CGTTTCGTGT ACAACTGCCG
GTTAAGCAGA GCGCAACGCT GTGA
 
Protein sequence
MSDLTNRRIL LIDDMPTIHE DFRKILAPAK AQNTELDEME GLLFGEQIKN DRPVFELDSA 
YGGEEGLGLL KRALQASKPY ALAFVDMRMP GGWDGAQTIE HLWEEDPLLQ VVVCTAYSDY
SWDELLDRLQ AHDRLLILKK PFDNIEVQQM ASTLLTKWEM TQRASLKMHQ LEQRVERRTQ
QLTQASEALQ QEIEERKQLE SQLVQSEKLA SLGQMAAGVA HEINNPIGFV SSNLGTLGGY
FQQLLAMLDA YRQAELMLGA NETTGRLQRL REQTELEFLM EDIPILIKES KDGIGRVAHI
VKDLKDFSRV DNAQQWQLAD LQQGIDSTLN IVASELKHKA DVVKRYQPLP PVECLPSQIN
QVIMNLVLNA VQAMGPERGT ITLGTVHQGD WVCIDVADTG AGIAPENIKK IFDPFFTTKP
VGQGTGLGLS LSYGIVKKHG GEISVSSQVG VGTTFRVQLP VKQSATL