| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2653 |
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| Symbol | |
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| ID | 5191160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3031795 |
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| End bp | 3033747 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587105 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_001267971 |
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| Protein GI | 148547869 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATG TGCTCTGGCG CCCGTCCACA ACGCAGATCG AGGCCAGCCG GATGGATGCC
TTCCGCCGCC GGGTCAACCT GCGCTACAAC CTGCAACTCA ACGACTACCA GGCCCTGCAC
GGCTGGAGCA TCGAACAGCG CCCCGCCTTC TGGCAAACCC TTGCCGATTA TTTCCACGTT
CATTGGCATA CGCCGCCCAG CCAGGTGCTC AGCGAAGGGC CGCAAATGCC CGATGCGCAG
TGGTTCGCCA ATGCCACCCT GAACTTTGCC GAACACCTGC TGCGCCGCCG TGACGACCGC
CCAGCCGTGG TCGCCGTACG CGAAGACGGC CAACGCGAAG TGTTCAGCCA TGCTGAACTG
GCCGCACAGG TGGCCGGGCT GCAAACGGCG TTCAAGGCTG CAGGTATCGT CCCGGGCGAC
CGGGTAGCCG CCATCATGCC CAATACCTGG CAAACACTGG TGGCCATGCT CGCCTGCACC
AGCCTTGGCG CGGTCTGGTC TACCTCTTCG CCCGAGTTCG GCGTGCACGG CATCATCGAC
CGCTTCGGCC AGATCGAACC CAAGCTGCTG ATCGTCTGCG CCGGTTACGA GTATGCTGGC
AAGGCCATCG ACCAGGTGAC CAAGGTCAAC CAAGTGTGTG CGCAGTTGCC TGGCCTGGAG
CAACTGATCG TGGTGCCCCA TACCCGCAAA GGCACGCGTG CCGACGAATT CCAGGCAGCC
AACGTCAGCC TCTGGGATGA CTTTTTCCAG CCCGGCGGCG AGCCCCGTTT CACCCCGCTG
CCGTTCGACC ACCCGCTGTA CATCCTCTAT TCCAGTGGCA CCACTGGCGT GCCCAAGTGC
ATTGTCCATC GCGCCGGAGG CGTGCTGTTG CAGCACCTCA AGGAACACGG CTTGCACAAC
GACCTGAAGG CCGATGACGT GCTGTTCTAC TACACCACCT GCGGCTGGAT GATGTGGAAC
TGGCTGGCCA GCGGCCTGGC GGTGGGTGCC ACGCTGGTGC TGTACGACGG CTCGCCGTTC
CACCCAGGCC CCGGGCGCCT TCTGGACCTG ATAGAGGCCG AGGGTATCCA CGCTTTCGGT
ACCAGCGCCA AGTACCTGGC GGCACTGGAG CAGGCAGGCC TGGAACCTGC CAACAGCCAC
TGCCTGAGCA GCCTGCGGCT GCTGCTGTCC ACCGGTTCGC CGCTGTCACC GCACAGCTAT
GACTATGTGT ACGACAAGAT CAAGGCCGAC CTGTGGCTCG TGTCCATGTC GGGCGGCACG
GACATTGTCT CCTGCTTCGT GCTGGGCAAC CCGACCCTGC CTGTGCGTCG TGGCGAAATC
CAGTGCAAGG GCCTGGGTAT GGCGGTGGAG GTGTGGAACG AGCAGGGTCA GCCCGTGGTG
GACGAAAAAG GCGAGCTGGT GTGCACGCGC AACTTCCCCT CGATGCCACT CGGTTTCTGG
AACGACCCGG ACGGTCGCCG TTACCACGAT GCTTACTTCA GTCAGTTTCC GGGGGTGTGG
GCCCAAGGCG ACTACGCCGA GCAGCGTGCC AGCGGGGGCA TGGTGATCCA CGGTCGCTCC
GACGCCGTGC TCAACCCGGG CGGTGTGCGC ATTGGCACGG CGGAAATCTA CCGCCAGGTG
GAAAAGGTCG AACAGGTCGT GGAAAGCGTG GCCATCGGCC AGGACTGGAA CGGGGATGTG
CGGGTGGTGC TGTTCGTGCG CCTGCAAGAC GGCCTGCAGC TGGATGAAGC CTTGCGCCAG
CACATCCGTC AGGTGATACG CCAGTACACC ACGCCCCGCC ATGTGCCGAC GGTGATCGCC
CAGGTCAGCG ACATACCGCG CACCATCAGT GGCAAGCTGG TGGAACTGGC GATTCGCGAT
GTGGTGCATG GGCGGCCGGT GAAGAACACC GATGCCCTGG CCAACCCGGA GGCGCTGGAT
CAGTTTCGCG ATCGCGCAGA GCTGAAGAGC TGA
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| Protein sequence | MNDVLWRPST TQIEASRMDA FRRRVNLRYN LQLNDYQALH GWSIEQRPAF WQTLADYFHV
HWHTPPSQVL SEGPQMPDAQ WFANATLNFA EHLLRRRDDR PAVVAVREDG QREVFSHAEL
AAQVAGLQTA FKAAGIVPGD RVAAIMPNTW QTLVAMLACT SLGAVWSTSS PEFGVHGIID
RFGQIEPKLL IVCAGYEYAG KAIDQVTKVN QVCAQLPGLE QLIVVPHTRK GTRADEFQAA
NVSLWDDFFQ PGGEPRFTPL PFDHPLYILY SSGTTGVPKC IVHRAGGVLL QHLKEHGLHN
DLKADDVLFY YTTCGWMMWN WLASGLAVGA TLVLYDGSPF HPGPGRLLDL IEAEGIHAFG
TSAKYLAALE QAGLEPANSH CLSSLRLLLS TGSPLSPHSY DYVYDKIKAD LWLVSMSGGT
DIVSCFVLGN PTLPVRRGEI QCKGLGMAVE VWNEQGQPVV DEKGELVCTR NFPSMPLGFW
NDPDGRRYHD AYFSQFPGVW AQGDYAEQRA SGGMVIHGRS DAVLNPGGVR IGTAEIYRQV
EKVEQVVESV AIGQDWNGDV RVVLFVRLQD GLQLDEALRQ HIRQVIRQYT TPRHVPTVIA
QVSDIPRTIS GKLVELAIRD VVHGRPVKNT DALANPEALD QFRDRAELKS
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