| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2638 |
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| Symbol | |
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| ID | 5195040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3015870 |
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| End bp | 3017003 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640587090 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001267956 |
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| Protein GI | 148547854 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.671719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG ACACCCGCAC CACGACCACC ACCGCCATCG CCGAAACCCC GGAGGGCGTC
ACACCGCCCA GTGAACCAAC CAGCCCGGTA CGCACGCGGC GGGTGCGCAT CCTGTCATCC
ATCAGCTTCG CCGCCGTGGC GTTGGCCGGC ATCCTGTTGG TGCTGTATGC CTGGCGCCTG
CCGCCATTCA GCAGCGCCAT CGAAAGCACC GAGAACGCCC TGGTGCGGGG CCAGGTGACC
ATCATCGGCC CGCAACTCAG CGGCTACGTC GTCGATGTAC CAGTGCATGA CTTCCAGTTC
GTCAAGGCCG GCGACTTGCT GGTGCAACTG GACGACCGTA TCTACAAACA ACGCCTTGCC
CAGGCCAGCG CGCAGCTGCA ACAGCAGTTG GCGGCCCTGG CCAACAACCA GCAGCAGCGC
AAAAGCGCCG AAGCGACCAT TGCCCAGCGC CAGGCCGCCA TCGGCGATGC TGCGGCCCAG
GCGGCCAAGG CCAAGGCTGA CCTCGGCCGC AACCAGGCGC TGGTCAACGA TGGATCAGTG
TCGCGCCGCG ACCTGGACCT GGCCCGTGCC AGCGAGGCCG CTGCCGTCGC CAGCCTGGCC
CAGGCCAGGG CGGCGCTGGA AATCGCCCGC CAGGACCGTG AGACCGTGGT GGTCAACCGG
GCCGCACTCG AGGCCTCGGT GGAGAACGCC AAGGCCGCCG TGGAGCTGGC ACGCATCGAC
CTCGACAACA CCCGCGTCAC GGCCCCGCGC GATGGCCAGC TGGGGCAGAT CGGCACCCGC
CTGGGTGCTT ATGTCAACTC CGGCGCGCAG CTCATGGCGC TGGTGCCCGA CACCCTTTGG
GTGATTGCCA ACATGAAGGA AACCCAGATG GCCAATGTGC GTATCGGCCA GCCCGTGAGC
TTTACCGTAG ACGCGCTGAA CCACCGGAAG CTACGGGGCC ATGTGCAGCA GATTTCGCCG
GCCACCGGCT CTGAATTCGC CTTGCTGCAG GCGGACAACG CCACTGGCAA CTTCGTCAAG
ATCGCCCAGC GCATACCGGT GCGCATCACG GTGGATGCCG ACCAGCCGAC TGCCAGGCAT
CTGCGCCCAG GGATGTCGGT GGTGGTCAGT ATCGACACCC GGGGCGAACA GTGA
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| Protein sequence | MTDDTRTTTT TAIAETPEGV TPPSEPTSPV RTRRVRILSS ISFAAVALAG ILLVLYAWRL
PPFSSAIEST ENALVRGQVT IIGPQLSGYV VDVPVHDFQF VKAGDLLVQL DDRIYKQRLA
QASAQLQQQL AALANNQQQR KSAEATIAQR QAAIGDAAAQ AAKAKADLGR NQALVNDGSV
SRRDLDLARA SEAAAVASLA QARAALEIAR QDRETVVVNR AALEASVENA KAAVELARID
LDNTRVTAPR DGQLGQIGTR LGAYVNSGAQ LMALVPDTLW VIANMKETQM ANVRIGQPVS
FTVDALNHRK LRGHVQQISP ATGSEFALLQ ADNATGNFVK IAQRIPVRIT VDADQPTARH
LRPGMSVVVS IDTRGEQ
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