| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2606 |
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| Symbol | |
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| ID | 5194401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2969463 |
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| End bp | 2970290 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587059 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001267925 |
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| Protein GI | 148547823 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.43455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACA ACAAGATCCT TTCTCAGTGG CTAGGCCTGG AGTCGGCCGT ATGCGTGGTG
ACCGGCGCGG CCGGCGGCAT TGGCGCAGCG TTGGCCGCAG CCTTGGTGGA GCAGCAGGCC
CACGTGGTGC TGCTTGACCG CGACCTGGAC AAATGCCGCG AACTGGCGGC CACCCTGGGG
GAACACAGTG CAGGCGAAGT CAGTGCCCTG GCCTGCGACA TTGCCGACCC GGCCAGCGTG
GAGCAGGCTG CGGCCCAGGT ACAGGCGCTG CATGGGCGCT GCGATGTACT GGTCAACAAT
GCCAGCGTGC TGCGCCCCGG TGCGCTGGAC ACGCTAAGCC TGGAACAATG GAACCAGGTG
CTGGCGGTCA ACCTCAGTGG CTATCTTTTG TGTGCCCAGG CCTTTGGCCG TTCCATGCTG
GACTGCGGCC AGGGCCGTAT CGTGCATGTG GCCTCGATTG CAGCCCATTA CCCGCAACCC
AACAGTGGCG CCTACAGCGC GGCGAAGGCA GGCGTCAGCA TGTTGTCGCG GCAGATCGCC
GTGGAATGGG GGCCGCGCGG TGTGCGCAGC AACGCCGTAT GCCCGGGTTT GATCCGCACG
CCATTGTCGG CGGCGTTCTA TGCCGACCCA CAGGTGGCGC GCCGGCGTAG CGCCATGACC
GCCAACCAGC GCATCGGTGA GCCGCAAGAC ATCGCCGAAG CCGTGCTGTT TCTGGCCAGC
CGCCGCGCCG ACTATATCAA CGGCGCCGAG CTGACCGTGG ATGGCGGATT GGAAAGCATG
CCCATGGCAT TGATCCCGCG CCCTGGCTTC GAGGGGGCAG GCCAATGA
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| Protein sequence | MHNNKILSQW LGLESAVCVV TGAAGGIGAA LAAALVEQQA HVVLLDRDLD KCRELAATLG
EHSAGEVSAL ACDIADPASV EQAAAQVQAL HGRCDVLVNN ASVLRPGALD TLSLEQWNQV
LAVNLSGYLL CAQAFGRSML DCGQGRIVHV ASIAAHYPQP NSGAYSAAKA GVSMLSRQIA
VEWGPRGVRS NAVCPGLIRT PLSAAFYADP QVARRRSAMT ANQRIGEPQD IAEAVLFLAS
RRADYINGAE LTVDGGLESM PMALIPRPGF EGAGQ
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