| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2549 |
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| Symbol | |
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| ID | 5191980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2903163 |
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| End bp | 2904077 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587002 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_001267868 |
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| Protein GI | 148547766 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.806201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA ACATTTCCCA TACTGCCGAG GTACAGCAGT TCTTCGAGCA GGCCGCAGGC
TTTGGTAATG CGGCCGGCAA CCCACGCCTC AAACGCATCG TGCAGCGCCT GCTGCAGGAT
ACCGCGCGGC TGATCGAAGA CCTGGACATC AGCGAAGACG AGTTCTGGCA CGCCGTCGAC
TACCTCAACC GCCTGGGCGG TCGTGGCGAG GCCGGGCTGC TGGTGGCGGG GCTGGGCATC
GAACACTTCC TCGACCTGCT GCAGGATGCC AAGGACCAGG AGGCGGGGCG CGTTGGCGGT
ACCCCACGCA CCATCGAAGG CCCGTTGTAC GTGGCTGGCG CACCGATTGC GCAAGGTGAA
GTGCGCATGG ACGACGGCAG CGAGGAGGGC GTGGCCACGG TGATGTTCCT GGAAGGCCAG
GTGCTGGACC CGCACGGACA CCCGCTGCCG GGTGCCACGG TCGACCTGTG GCATGCCAAT
ACCCGTGGTA CCTATTCGTT CTTCGACCCA AGCCAGTCGG CGTACAACCT GCGTCGGCGC
ATCGTTACCG ATGCCCAAGG GCGTTACCGC GCGCGCTCCA TCGTGCCATC GGGCTATGGC
TGCGACCCGC AGGGGCCAAC CCAGGAATGC CTGGACCTGC TGGGCCGTCA TGGCCAGCGC
CCGGCCCATG TGCACTTCTT TATCTCGGCG CCAGGGTACC GGCACCTGAC CACGCAGATA
AACCTGTCGG GGGACAAGTA CCTGTGGGAT GACTTTGCCT ATGCCACACG GGACGGGTTG
GTCGGGGAGG TGGTGTTCGT CGAAGGGCCG GAGGGTCGGC ATGCCGAGCT GAAGTTCGAC
TTCCAGTTGC AGCAGGCCCA GGGCGGTGCC GATGAGCAGC GCAGCGGGCG GCCGCGGGCT
TTGCAGGAGG CCTGA
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| Protein sequence | MTVNISHTAE VQQFFEQAAG FGNAAGNPRL KRIVQRLLQD TARLIEDLDI SEDEFWHAVD
YLNRLGGRGE AGLLVAGLGI EHFLDLLQDA KDQEAGRVGG TPRTIEGPLY VAGAPIAQGE
VRMDDGSEEG VATVMFLEGQ VLDPHGHPLP GATVDLWHAN TRGTYSFFDP SQSAYNLRRR
IVTDAQGRYR ARSIVPSGYG CDPQGPTQEC LDLLGRHGQR PAHVHFFISA PGYRHLTTQI
NLSGDKYLWD DFAYATRDGL VGEVVFVEGP EGRHAELKFD FQLQQAQGGA DEQRSGRPRA
LQEA
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