Gene Pput_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2505 
Symbol 
ID5191774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2852967 
End bp2853626 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID640586958 
Productglycosyl transferase family protein 
Protein accessionYP_001267824 
Protein GI148547722 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCG TTGTCATCCC TGCACATAAT GAAGCCCGCC GCCTTGGGCG ATGCCTGCGG 
GCAGTGCTGA TCGCTGCCCA GCAGGCGCAG CATGCGGGAA TGCACGTGGA AGTGCTGGTG
GTACTGGACC GCTGCAGTGA CGGCAGCGCC GCCGTGGCGC GGCGTTTCGG CGTACACCTA
CTGGAGGTGG ATGCCGGTAA TGTCGGCATG GCACGTCGCG TGGGCGCGGC GCACATGGTC
GAGCGGGGCG CCACATGGTT GGCGTGCACC GATGCGGACA GCCGGGTCCC GGCGCACTGG
CTGCTGTCGC AGCTGGCCTG CAGCGCCGAG GTGGTTTGCG GCACCGTGCA TGTCGAGTAC
TGGCATCCCT GGCAGACAGC CGCGCTGCGC AAGCTGTACC AGAGCCGCTA CCAGGCGTGT
GAAGGGCATC GGCATGTGCA CGGCGCAAAC CTGGGGGTAT GTGCCAATGC CTATGAGCGT
GTGGGTGGCT TTCAGCCCCT GGCGGCGCAT GAAGATGTGC AGCTGGTCAG CGACCTGCAG
GCCAGCGGCG CCCAGATCGT CTGGACCGCC AGGCATAGTG TGGCCACCAG CAGTCGACGT
GACAGCCGCG CCCGCGAGGG GTTTGGTGAT TACCTGGCGG GGTTGCAGGC GCAGTCTTGA
 
Protein sequence
MIAVVIPAHN EARRLGRCLR AVLIAAQQAQ HAGMHVEVLV VLDRCSDGSA AVARRFGVHL 
LEVDAGNVGM ARRVGAAHMV ERGATWLACT DADSRVPAHW LLSQLACSAE VVCGTVHVEY
WHPWQTAALR KLYQSRYQAC EGHRHVHGAN LGVCANAYER VGGFQPLAAH EDVQLVSDLQ
ASGAQIVWTA RHSVATSSRR DSRAREGFGD YLAGLQAQS