| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2457 |
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| Symbol | |
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| ID | 5194847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2805336 |
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| End bp | 2807183 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586910 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001267776 |
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| Protein GI | 148547674 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.133798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA ACAAGGATAA GCCCTGGACG CTCTACCTCC TGGCAGTTGG CCTGGCAGTG
CTCGCTGCCG TGCAGTTCGG CCTGTTCAGC CAGCCGGCCG TGCAAGCCAT TCCTTACAGC
CAGTTCCTGC AACTACTCGA TCAGCAGAAG GTCAGCGACC TGCATATCGA GCACGAGCGG
ATCCTCGGCA GGCTGCAGGA GCCGATCGAT GGCCACTCGG TATTCTCCAC CGTTCGCGTC
GACCCGGCTC TGAGCGAGCA ACTGGGACGC TCTGGAGTCG CGTTCTCTGG CGTCGTCGAG
GACAACACGG TAGCGACCGT GATGGGCGCG TTGATGCCGC TGTTGATGCT GCTGGCGCTG
TGGTACTTCC TGTTTCATGG CCTGGGGCAG AAACAGGGGT TGGGCGGGTT GATGGGGGTG
GGCAAGTCGC GTGCGCGGGT CTATGTCGAA CACGACACCC AGGTGACTTT CGCCGACGTG
GCCGGTATCG ACGACGTCAA GGGCGAGCTG ACCGAGATCG TGTCCTTCCT GAAAAACAAG
GCGTGGTATG CGCGACTTGG CGCCCATGTG CCCAAGGGCA CGCTGCTGGT AGGCCCACCC
GGCACCGGCA AGACCCTGGT CGCCAAGGCC ATCGCCGGGG AAGCAGCGGT GCCATTTTTC
TCGATTTCCG GCTCGGAGTT CGTGGAGATG TTCGTGGGCG TGGGTGCCGC CCGGGTGCGT
GACCTGTTCG ACCAGGCCCG CCAAGCGGCG CCTTGCATCA TCTTCATCGA TGAGCTGGAT
GCCCTGGGCA AGATGCGCGG CGTCGGCAGC TTTGGCGGCA ATGACGAGAA AGAGCAAACC
CTCAATCAGT TGCTCGCCGA GCTCGACGGC TTCGACCCAC GGGAAGGCGT GGTGCTGTTG
GCAGCGACCA ATCGCCCGGA AGTGCTGGAC CCGGCGCTGC TGCGTGCTGG GCGCTTCGAC
CGGCAGATTC TCATCGACCG GCCCGACCGC AAGGGCCGCC TGGCGATCCT GAAAGTCCAC
CTGCACAAGA TCATCTACAA GAACGACCTG GACTGCGAGC GGATTGCCGA GATCACCCCG
GGCCTGACGG GCGCCGACCT GGCCAACCTG GTCAACGAGG CTGCCATCGT TGCCACCCGG
CGGTCCAGCC AGTGGGTCGA GTTGCAGGAC TTCACCGCTG CGGTCGAGCG ACTGGTGGCG
GGCATCGAGC GCAAAGGCAG CGTATTGCGC AGCGACGAGC GCCAGGTGGT GGCGTACCAC
GAAATGGGCC ATGCCCTGGC CGCCAGTAGC CTGCCGGCGA TGGACCCGGT GCACAAGGTG
TCGATCATTC CCCGCGCCGC GGGTTCACTG GGCTACACCC TGCAACGGCC GACCGATGAC
CGCTACCTGA TCAGCACGCA GATGCTGCGT GACCGCCTTG TCGTGCTGAT GGCCGGGCGC
GCCGCCGAGC ACCTTGTGTT CGGCCAGGTC TCCACGGGGG CCGCCGACGA CCTCGGGCGC
GCCACCGATA TCGCCCGCCA GCTGGTCACC CGCTTCGGCA TGAGCCCGGT GCTGGGCCAG
GCGGTGCTTG AGCGCCAGCA AGCCGGCTAT CTGGGTGACT CGCTGTTGCG TCAGGAGCGC
AAGGACTACT CGGAGCAAAC TGCGCGCGAG ATCGACCTCG CTGTCCGCGG CTTGCTCGAA
GAAGCCTATG GCCGCGCCCG GGCTTTGCTG GAGCAGCGCC GCGACGACCT GGATGCAGGC
GCGCGTCTGT TGCTGGCCAA GGAGACCATC ACCCCCGAAG AATTCCCGGC GTTGCAACCG
CAAGCCAATG AGCCCGCCAC CTATGTGCTG GTCGATGCCA CGAAATGA
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| Protein sequence | MAMNKDKPWT LYLLAVGLAV LAAVQFGLFS QPAVQAIPYS QFLQLLDQQK VSDLHIEHER
ILGRLQEPID GHSVFSTVRV DPALSEQLGR SGVAFSGVVE DNTVATVMGA LMPLLMLLAL
WYFLFHGLGQ KQGLGGLMGV GKSRARVYVE HDTQVTFADV AGIDDVKGEL TEIVSFLKNK
AWYARLGAHV PKGTLLVGPP GTGKTLVAKA IAGEAAVPFF SISGSEFVEM FVGVGAARVR
DLFDQARQAA PCIIFIDELD ALGKMRGVGS FGGNDEKEQT LNQLLAELDG FDPREGVVLL
AATNRPEVLD PALLRAGRFD RQILIDRPDR KGRLAILKVH LHKIIYKNDL DCERIAEITP
GLTGADLANL VNEAAIVATR RSSQWVELQD FTAAVERLVA GIERKGSVLR SDERQVVAYH
EMGHALAASS LPAMDPVHKV SIIPRAAGSL GYTLQRPTDD RYLISTQMLR DRLVVLMAGR
AAEHLVFGQV STGAADDLGR ATDIARQLVT RFGMSPVLGQ AVLERQQAGY LGDSLLRQER
KDYSEQTARE IDLAVRGLLE EAYGRARALL EQRRDDLDAG ARLLLAKETI TPEEFPALQP
QANEPATYVL VDATK
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