| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2451 |
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| Symbol | |
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| ID | 5194055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2799787 |
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| End bp | 2800665 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586905 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001267771 |
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| Protein GI | 148547669 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.512934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGT ATCGCCGGAT TTTGCTGATC ATGACCAAGG CTCAAGCCAA TGCCGCGCTG
GACCGGGCCA TGGCCCTGGC TGCGGCGTCT GGTGCTTCCC TGCACGTGCT GGGTATTCAT
GAACCCGGCG AACTGCGCCT GCGCCACGAG TTGCCGACAC CCCCGCTGCC TTGCGTTTCA
TTCGTGCACT TCAGCACAGC GCTCAAGGCG CTGCTCGATG AACAGCCGGC AAGGGGGGCA
CGCCCAGGTT TCGAGGCCGT GGAAACCTCC GATCCCCGAG ACCTGGTGCC GGCCTGCATT
GCCCGCTATG CGCCTGACCT GGTGATCAAG GACTGCTCGG GCTGTTCCCT GATCGATCAG
CGGGCCCGGA CTTCACTTGA CCAGGTACTG TTGCATGGGA GCGAGGTGCC GTTGATGTTC
GTACCGGCGA ATGCCCCAGC CATGCCAGCT AGCGTGCTGG TCGCGGTGGA TGTATCCCAC
GCCTCGCCGC TCAATGACGC ACTGGTGATG GCCGGTCAGC AACTGGCAAC GCAATGCCAG
GGCCCGCTGA ACCTGCTTTC GGCTTACGAC CTGCCAATCG CCATGCTGGC AAATCCTGAC
CTCGCCGGCC CTTGGGCGGA TGAGGTGCGG GAATCGCTGC AGTTGCCGTT CGATGCGTTG
GCCGATGCCC ACGGCATCGC CCACAACCAT CGATTCTTCA GCGAAGGTGC GCCGTTGCGT
GTCATCAAGT CTCATATCGC AGCGCTGGGA GCCGATGTGG TGGTGGTCGG CGCCGTGCAG
GCCAGGCGTT GGGCCAAGCT GATCGGCGAT ACCACCGAGC GGCTTGTCAG CCATGCGCCG
TGCAGCATCC TGACGATCAG GCCTGCACCT GGCAGTTGA
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| Protein sequence | MSPYRRILLI MTKAQANAAL DRAMALAAAS GASLHVLGIH EPGELRLRHE LPTPPLPCVS
FVHFSTALKA LLDEQPARGA RPGFEAVETS DPRDLVPACI ARYAPDLVIK DCSGCSLIDQ
RARTSLDQVL LHGSEVPLMF VPANAPAMPA SVLVAVDVSH ASPLNDALVM AGQQLATQCQ
GPLNLLSAYD LPIAMLANPD LAGPWADEVR ESLQLPFDAL ADAHGIAHNH RFFSEGAPLR
VIKSHIAALG ADVVVVGAVQ ARRWAKLIGD TTERLVSHAP CSILTIRPAP GS
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