| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2421 |
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| Symbol | |
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| ID | 5190935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2768033 |
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| End bp | 2769283 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640586877 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001267743 |
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| Protein GI | 148547641 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.300177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC AACTCGAAAC CCACGCCAAC GAAGCTGACG GCGAGACTCA GAGGGCCAAC
GTTCTGACGG CCAAGGTCAT CCTTCTACTG GCAGCACTCG CTGCCATCAG CAACTTGTCC
ACCAATATCA TCCTGCCCGC TTTTCCTGAA ATGGCTCGAC AGTTCAACGT CTCATCCCAG
AAACTCGGGC TGACGCTCTC CAGCTTTTTC ATCACCTTCG CCTTCGCCCA ATTATTGGTA
GGGCCGCTTG CCGATCGCTA TGGCCGCAAG CGGCTGGTAG TGGGTGGGCT GATGATTTTC
GTGGTGGGTA CGTTTTGGGC GGCTAACGCC GCCACATTCG ACATGCTGAT CCTCGGACGA
GTAATCCAGG CTATTGGCGT GTGTGCCGCC GCGGTTCTGG CCAGAGCCAT CGCTCGCGAT
CTTTATGAGG GTGAGAACCT GGCACGCGCG TTATCGCTGA CGATGATCGC TGCCGCCACA
GCACCAGGCT TCTCACCTTT GATCGGCAGT ATGCTGAACA CCACTTTGGG ATGGCGTGCA
CTTTTTGTAG TCGTCGGCAT GTCGGCAATC CTTATCGCGC TGTTCTACGT CAGAGGGATA
GGTGAAACCC TTCCTAGCCG TCGTCGGGTG ACTCAATCAG TACCTGCGGT CCTGATCGCA
TACGGCAAAC TGGCGTCCAA CCGCCTCTTC ATTTTGCCCG CACTGGCGAC CAGCCTGCTG
ATGAGCGGCT TATTCGCCTC GTTCGCCGCT GCGCCGTCCA TCTTGATGGA AGGCATGGGG
CTCAACTCGC TCCAGGTGGG TCTGTATTTC GCTGCAACTG TCTTCGTAGT CTTTGCCGCT
GGCTTGGCTG CTCCTCGCCT GGCTCACCGT TGGGGTAGCC GAGCCATCAC CTTGTCAGGC
CTCGCGACTG CGTGTTTGGC GGGTGCATTG CTGCTGATAG GCCCGAGCAA TCCAAGCTTC
GGCTGGTACT CATTGTCGAT GGTGCTTTTC CTATGGGGTA TGGGTATTGC CAATCCGCTG
GGAACGGCCT TGACCATGAC ACCGTTCGGG AAAGAAGCAG GACTGGCCTC AGCCCTTTTG
GGATTCCTCA CCATGGCAAT CGGAGCAGTG TCGACCTGGA TGGTTTCAAC GCCGAAGTTT
TCCACTGTTG CCATACTGGG AACGACCCAA ACTGCAGTGT GCTTGCTAGC AATCATGCTG
TTCGCGTGGT ATGCCAAACG AAAGGTACCA CACAGCACTC AGCGCACATG A
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| Protein sequence | MNSQLETHAN EADGETQRAN VLTAKVILLL AALAAISNLS TNIILPAFPE MARQFNVSSQ
KLGLTLSSFF ITFAFAQLLV GPLADRYGRK RLVVGGLMIF VVGTFWAANA ATFDMLILGR
VIQAIGVCAA AVLARAIARD LYEGENLARA LSLTMIAAAT APGFSPLIGS MLNTTLGWRA
LFVVVGMSAI LIALFYVRGI GETLPSRRRV TQSVPAVLIA YGKLASNRLF ILPALATSLL
MSGLFASFAA APSILMEGMG LNSLQVGLYF AATVFVVFAA GLAAPRLAHR WGSRAITLSG
LATACLAGAL LLIGPSNPSF GWYSLSMVLF LWGMGIANPL GTALTMTPFG KEAGLASALL
GFLTMAIGAV STWMVSTPKF STVAILGTTQ TAVCLLAIML FAWYAKRKVP HSTQRT
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