Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2418 |
Symbol | |
ID | 5192126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2763469 |
End bp | 2764191 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586874 |
Product | hypothetical protein |
Protein accession | YP_001267740 |
Protein GI | 148547638 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.605574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCAT CGTTGAAAGT CGCTTCCCTG TTGACCCTGA TGGTCAGCGT CAACGCAGGC GCCCACGGCC TGTGGACCGA GGAGCGACGT GGCAATATCG AGGCCGTATA CGGCCACGGC GCCGAGGATA ACGCCTACAA GGCGGAAAAG ATCAAGCGCG CCTGGGCGTT CGACGCGACC GGGAACATGG TCCCGGTCAC GGTCAAGCGC CTGGCGGATC ATGCCGTGCT GCAACCACTT ACCCCGCCTG CGGCACTTGC CGTGCTGCTG GACAACGGGC CTTGGTCGCA GCGCCCGGAC AGGCAATGGG TCAATCAGGA TCGCACCCAC GTCAAGGATG CGATCGCCTC CACCCACAGC TTGAAGTACA GCCTGGCGAT CTACCAGCGC GGTGCTCGGC TGCCGAAACT GGACATGCTG CGTTTGGCGA TTATCCCCCT GAGCGACCCT CTGCAAATCG GGCCAGGCAA GACGCTGGAA GTGCAGGTGC TGCTCGATGG CAAGCCGGCT GCGGATATAC CGCTGCAGGG TGATTACCGG GGCGCCCCTC ACCAGGTCAG CGCCACCACC GACAAGCAAG GCCGGGCACG TATCACCGTA CGCAATGAAG GACTCAACAT CATCGCGGCC CAGGCTACCC TGCCAATGGC AGACGGCAGC CCCGTGGCCC AGCAGAGCCT GTTCAGTTCA CTGTCGTTCC TGGGTGAGCC GCACCACGAG TAG
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Protein sequence | MHPSLKVASL LTLMVSVNAG AHGLWTEERR GNIEAVYGHG AEDNAYKAEK IKRAWAFDAT GNMVPVTVKR LADHAVLQPL TPPAALAVLL DNGPWSQRPD RQWVNQDRTH VKDAIASTHS LKYSLAIYQR GARLPKLDML RLAIIPLSDP LQIGPGKTLE VQVLLDGKPA ADIPLQGDYR GAPHQVSATT DKQGRARITV RNEGLNIIAA QATLPMADGS PVAQQSLFSS LSFLGEPHHE
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