| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2412 |
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| Symbol | |
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| ID | 5194012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2757367 |
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| End bp | 2759520 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586869 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001267735 |
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| Protein GI | 148547633 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCA TGACCACTTT GGCGCTGCTC GTTGGCAGCG CAACCTGTGC CTGGGCGCAG
GATGACACCC TGACCCTGCC GGCCAGCACT GTCACGGCCA CAGCCAATCA ACCCACGGAG
GCAACCCGCC TTGACCTTGA TCGCCCCATC GAAAGCGGCT CGCGGCTGAA CCTGAGCGCC
AGGGAGAACC CCGCCTCCGT CAGCGTTGCC GACCGCAAGA CCATGGAGCG CATTGGCGCA
CGTAACTTCC AGGACGCCGC CAATGCACTG CCCGGGGTTA ACGCCTCGGC TCCGCCCGGC
TGGGGGGGAT ATGTGGCGTA CCGAGGGTTC AACGGTGCCC AGATCAGCCA GTTGTTCAAT
GGCATCAGTT TGCAGTATGG CGGCGCGGCG CGCCCGGTGG GCGCCTGGAT CTACGACCGC
GTCGAATTGC TCGGCGGGCC GTCCTCCTTC CTCAACGGCA GCGGCGCTGT CGGTGGCAGC
CTCAATTTCA TCACCCGGCT GGCAAGCCGT GACGAAGACA CCTTCGAAGG GCGCGTCAGC
TATGCACGCT ACGACACCAT GGAAACGTCG ATCGCCTTCA ACAAGGCGCT GAACACGGGC
GACGGCCCAC GCCACTATGC ACGCCTCGAC TACAGCCGCA CCAGCACCAA CGGCTATATC
GATCGCCAGG AGAATGGGGC CGGCAACCTG GCCTTCTCGC TGCTTAGCGA CATCAACGAC
CAGCTCTCGC ACACGCTGGC CATCGAGTAC CTGGAAGAGC AAGAGGACAG CCCCTACTGG
GGCACACCGG TATTGCAGCC ACTGGTCGGT ACCTTGCACA TCGACAAGCA CAACCGTTTC
AACAACTACA ACGTCGAAGA CGGTCGCTAC GAGCAGCGCA CCCGGTGGCT GCGCTCGATC
ACCGACTACC GCGTCGACGA CAACACCCAA CTGCGTAATA CCTTCTACCA CTACAACGGC
CAGCGCGATT ACCGCAATCT CGAGGTGTAT CGCTACAACG CCGACAACAG CGCCATCGCT
CGCTCCGGCG GCTATCGCCA GCGGCACGAC CAGGAGGTCA ACGGCAACAA GCTCGAGCTG
ACCCACCAGG GCCAGTTGTT CGGCATGGCC AGCGACTGGG CGTTCGGCAT GGACTACAGC
ACCAACCAGC AAACCAACTA CCCGCTGTCC AAGGGGGCGT TCGACACGGT TGACCCGAAT
AGCTTCGAAC CCGGGCACTT CCTCGATATC CCCGGCATGG ACGCGCCCAT GACCAAGGGC
AGAACCACCA CCACCGACAC CACCTCGGCC TTCGTCGAGA ACCGTACCCG CCTGACCGAT
CAACTGTCAT TGATCACCGC GCTGCGCTAC GACCATATCG ACTTCGACGT GGTCGACCAT
GTGGCGCGAG CCAGGCTCGA CCGACGCTGG GACGCCATCA CCGGTCGCCT GGGCCTGGTC
TATGACCTGA CCTCCAACGT CAGCCTGTAC ACCCAATACA GCACCTCGGC CGAACCACCA
GGCGGTACCC TGACCAGCGC CTCGATCAGC CAGGTCGGCG ACTTCGACCT GAGCACCGGC
CGTCAGGTCG AGGTAGGCAG CAAGTTCGAC TTCCTCGACG GCCGCGGCTC GGCGACGGCA
GCGGCGTATC GCATCGTGCG CAAGGATATC TCCGTGCCCT CCTCGACCGT GCCCAACACC
ACCGAGCAGG CGGGCCAGCA GACCTCCACC GGCATCGAGC TGGCAGCCTC GTTCAAGGTC
ACGTCCAAGC TGCTGGCGGC GGGCAACTTC AGTTGGGTGA ATGCCGAATA CGATGAGTTC
AACGAGACCA TCGGCGGCGT GGTGTACTCG CGCAAGGGCA AGCACCCGGT CAACATCCCC
GACCGCGTGG CCAACCTCTG GTTGACCTAC GACCTGGCGC CCGGCTGGCA GGTCGGGGCA
GATGCCCGCT ATGTCTCATC GGTGTACGCC AACACCGCCA ACACCGCATG GGTACCGTCG
TACACCGTCT ACGGGCTGTC CATGACCCAC GACCTGGACA AGCACGTGCA AGTCAGCGCG
CGGCTGCGCA ACCTCACCGA CGAGGTGTAT GCCCGCTTCA TCCACCAGAC CAACACCCAG
TACTACCTGG GTGAACCGCG CAGCCTGGAA GTCGCTGTGC AGTGGCGCTA CTGA
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| Protein sequence | MFRMTTLALL VGSATCAWAQ DDTLTLPAST VTATANQPTE ATRLDLDRPI ESGSRLNLSA
RENPASVSVA DRKTMERIGA RNFQDAANAL PGVNASAPPG WGGYVAYRGF NGAQISQLFN
GISLQYGGAA RPVGAWIYDR VELLGGPSSF LNGSGAVGGS LNFITRLASR DEDTFEGRVS
YARYDTMETS IAFNKALNTG DGPRHYARLD YSRTSTNGYI DRQENGAGNL AFSLLSDIND
QLSHTLAIEY LEEQEDSPYW GTPVLQPLVG TLHIDKHNRF NNYNVEDGRY EQRTRWLRSI
TDYRVDDNTQ LRNTFYHYNG QRDYRNLEVY RYNADNSAIA RSGGYRQRHD QEVNGNKLEL
THQGQLFGMA SDWAFGMDYS TNQQTNYPLS KGAFDTVDPN SFEPGHFLDI PGMDAPMTKG
RTTTTDTTSA FVENRTRLTD QLSLITALRY DHIDFDVVDH VARARLDRRW DAITGRLGLV
YDLTSNVSLY TQYSTSAEPP GGTLTSASIS QVGDFDLSTG RQVEVGSKFD FLDGRGSATA
AAYRIVRKDI SVPSSTVPNT TEQAGQQTST GIELAASFKV TSKLLAAGNF SWVNAEYDEF
NETIGGVVYS RKGKHPVNIP DRVANLWLTY DLAPGWQVGA DARYVSSVYA NTANTAWVPS
YTVYGLSMTH DLDKHVQVSA RLRNLTDEVY ARFIHQTNTQ YYLGEPRSLE VAVQWRY
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