| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2410 |
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| Symbol | |
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| ID | 5193092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2754798 |
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| End bp | 2756849 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586867 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001267733 |
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| Protein GI | 148547631 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGT CCCGTTGCAC CGCACGCGCC GTATTGCCCG TGCTCGCCTT GTTCGGCCTC
AACCCACTGT CACTTGCCAT CGCTGAAACA CTGCCTGCCG AAAACTCGGT ACTCACCCTC
GGCGCGGTCA ATGTGACCGG CACCGACAGC GGCCCCCTGG CCACAACCAG CGTGCTCAGT
TCGGTGGATA TTCTGGGCGG TGACATCCTC GAGAAGATGC CAGTTGCCTA CAGCTGGGAG
CTGTTCCGCC GGGCACCGGG GGTGATGCTC ACCGAGTTCA ACCAAGGCAC CACCTCCGGC
AAGCTTTCGT TCCGCGGTTT CAATGGCGAA GGCGAAATCA ACGCCGTGAA ACTGTTGATC
GACGGCATTC CCAGCAACAC CAATGACGGC AACATGCCCT TCATCGACTC GGTGTTCCCC
ATGGACATCG ACAGCATCGA GGTGGTGCGT GGCACCAGCG ATCCGCGCTA TGGCCTGAAC
AACATTGCGG GCAACGTCAA CATCAATACC CGTACCGGCG GCAACTACAA CAAAGCGCGC
ATGCGTTATG GCAGCTTCAA CACCCGCGAG GTGCAACTGG CCAAGGGCAT CGAGACCAGT
AACTGGACGC AGAACTACTT CTTCGCCCGC CAGCAGGTCG ACGGCTACCG CGACCATGCC
GACACCGAAC GCTACAGCTT CGGCGGTAAA TGGTTCTACA CCCCGGACGA TGGCAACTAC
CGCGTGGGCC TGATCGCCCG CCATTACGAG TCCGAAGCGC AGGAGGCCGG CTACCTGACC
GAGGACAACG CCCGCCACCA CCCGCGCATG AGCAACGACT ACAACGCCAC GGACAAGGGC
ACGCGGCGGA TGAACCAGGT CAGCCTGCAT TTCGATACCG AACTGGCGCA GACCCTGTCC
TGGTCCGCCA GGACCTACGT CAACACCTTT GACGACCGGC GCTGGACCCA GTACTGGAGC
AGCAGTTCGC AGCAGGAACG CGACACGTAC GAAACCCAGT ACGGCGCCAT TACCTCGCTC
ACCTGGCGCC CGCAGGTCGA CTGGCTGCAT GCCTTCGCCC TGGAAGGCGG CAGCGATATC
CAGAAGCAGG AAAACCGCAG CGAACGTTAC CGCACGCTCA ACCGCGTGCG GCAGGCGCAA
ACCCGCGACC AGCGTTACGA CTTCAACACC GTGGGGGCCT ATGTGCAGGC GGAGATCGAA
CCGGTCGAAT CGCTGAAGAT TGTCCCGGCG TACCGTGTGG ACAGGATCAG CGGTGACTTC
ACCAACGAGA TGACCGGCCA GGATTACGAC ATCAACGACT ACGGCCTGAT CAAACAGCCC
AAGCTCAGCG TGGTCTATTC ACCCTGGAAG GTCGCCAGCG TCTATGCCAA TTGGGGCAGA
ACGTTCCAGG TGGGTACGGG CGCGGCCGCC TACAAAGTAC CACCGCGCAA CGAAGACCTT
TCTCCGTCGA TCAACGAAGG CTGGGAAACC GGTGTCAAGT TCACGCCAGC CGGTTGGGTC
GATGGCCGCT TCGCCTATTG GCGCCAGGAC GCCACGGGCG AGGTCAGCCG CCGTCTGAAC
GACCCCAGCG GCGAGTCGGA CAACGTCGGC GAGACACGCC GCTGGGGCTA TGACCTGCAG
GTTAACCTGC ACCCGGACGC ACGCACCGAG ATGTGGATGT CGTATTCCTG GCAGTACTCG
AAAATCCTTG AGCCCAGCAG TGCCTTGCCA GCCAGCAAAG GCAAGGAAAT CGACCACGTG
CCGCATCACC TGTGGAACAC CGGCATCAGC TACCAGGCCA CCCCTGCCCT GCAATTGACA
GCCTGGATGA ATGGCCAGAC CCACTACTAC CTGGAACGCG AGAATACCCA GGGCCGGTAT
GGCGGTTACG TACTCACGAA CCTTGGCGCG ACGTACAAGG TCACCGAAGC GATGAGTGTC
GACCTGCAGT TGAAGAACCT CACCAACCGC GACTATGAGT ACGTGTGGTA CGACCCGGAT
GGTGCGGAGG CTTCCCTGCA CGCCCCGGGT GACGGTCGAG CACTGTATGC CGGCGTGACG
TTCGACTTCT GA
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| Protein sequence | MPASRCTARA VLPVLALFGL NPLSLAIAET LPAENSVLTL GAVNVTGTDS GPLATTSVLS
SVDILGGDIL EKMPVAYSWE LFRRAPGVML TEFNQGTTSG KLSFRGFNGE GEINAVKLLI
DGIPSNTNDG NMPFIDSVFP MDIDSIEVVR GTSDPRYGLN NIAGNVNINT RTGGNYNKAR
MRYGSFNTRE VQLAKGIETS NWTQNYFFAR QQVDGYRDHA DTERYSFGGK WFYTPDDGNY
RVGLIARHYE SEAQEAGYLT EDNARHHPRM SNDYNATDKG TRRMNQVSLH FDTELAQTLS
WSARTYVNTF DDRRWTQYWS SSSQQERDTY ETQYGAITSL TWRPQVDWLH AFALEGGSDI
QKQENRSERY RTLNRVRQAQ TRDQRYDFNT VGAYVQAEIE PVESLKIVPA YRVDRISGDF
TNEMTGQDYD INDYGLIKQP KLSVVYSPWK VASVYANWGR TFQVGTGAAA YKVPPRNEDL
SPSINEGWET GVKFTPAGWV DGRFAYWRQD ATGEVSRRLN DPSGESDNVG ETRRWGYDLQ
VNLHPDARTE MWMSYSWQYS KILEPSSALP ASKGKEIDHV PHHLWNTGIS YQATPALQLT
AWMNGQTHYY LERENTQGRY GGYVLTNLGA TYKVTEAMSV DLQLKNLTNR DYEYVWYDPD
GAEASLHAPG DGRALYAGVT FDF
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