| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2396 |
|---|
| Symbol | |
|---|
| ID | 5194876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2734722 |
|---|
| End bp | 2735162 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640586853 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001267719 |
|---|
| Protein GI | 148547617 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.373992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACC TGGACGCTAA AGATCGTGAG ATTCTTGAGG TACTTTCGAA GGACGCGCGT
ATTGCGCTCA AGGCGTTAGC CGGCCGCATA GGCCTTTCCC GAAGTGCCAC CACCGAGCGT
GTCGCCAACC TTGAACGCAG CGGAGTCATT CGCGGTTATC GCGCTGACAT CGGCGAAATA
GACGCCAACG TGATACGCGC GATCTTGCTG GTGACGTTGC AGCGCACGCC TGCCATGGGG
CTGCTCGACC AGTTGGCAAC GGACGCGCGC GTACGGCGGG TGTCGTCGGT GAGCGGTCAG
CTCGACCTGG TGGTTGAAGT GGAGACCCGA ACGATCGACG ACCTCAACCA GGTACGCGAC
AACGTGGCAC GTCACGAATC AGTGGATGAC ATTACCACGT CGGTAGTCCT GCGCCGTGAT
ATCGACCGCC AGGGCGCCTG A
|
|---|
| Protein sequence | MRDLDAKDRE ILEVLSKDAR IALKALAGRI GLSRSATTER VANLERSGVI RGYRADIGEI
DANVIRAILL VTLQRTPAMG LLDQLATDAR VRRVSSVSGQ LDLVVEVETR TIDDLNQVRD
NVARHESVDD ITTSVVLRRD IDRQGA
|
|---|
| |