Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2283 |
Symbol | |
ID | 5192715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2602551 |
End bp | 2603207 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586740 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_001267606 |
Protein GI | 148547504 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.897597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.85963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA AGCCTGCTTG CACACTGTTG GCCCTGAGCC TGGCATTCGC CAGCCACCTG GCCATGGCCC ACGCCGGTCA CGCGCATGAC GGCCATGCCG GGCAGCCCCC GGCGGCGCAT CAGGAAAAGG CCAGTGTGCG TTTTGCCGAT GTGTCGCTGC TGAACCAGGA AGGCATGCCG GTACGTCTGG AGAAAGACCT GGTGGGTGAC CATCTGGTGG TCATGGGCTT CATTTACACC AGCTGCACCA CGGTATGCCC GGTGGTGTCG TCAATCATGG GCAAGGTCCA GCAGCAGCTG GGCGGCCGGG TAGGCGAGGA GGTTCGCCTG GTGTCGATCA GTGTCGACCC TCAGCGTGAC GACGCCAAGC GCCTGCAAAA CTATGCCAAG GCATTCCAGA AAGGGCCGGG CTGGAGCTGG CTGACCGGTA CCCCGTACGC CATCACCGAA ACCCTGAAGG GGCTGGGCAG CTTCAACGCC GACCTCAGCC AGCACCCGCC GCTGATACTG GTGGGTGACG GGCGTAGCGG GCACTGGACG CGTTACTACG GCTTCACCGA CCCGGGCGTA TTGATCGAAG AAATCAACCG CCTCAGTGCG CGCCGGGTAC ATGCCAAGAG CACCGCCATT GCCGACCATC ACGAGGTGCA ACCATGA
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Protein sequence | MNAKPACTLL ALSLAFASHL AMAHAGHAHD GHAGQPPAAH QEKASVRFAD VSLLNQEGMP VRLEKDLVGD HLVVMGFIYT SCTTVCPVVS SIMGKVQQQL GGRVGEEVRL VSISVDPQRD DAKRLQNYAK AFQKGPGWSW LTGTPYAITE TLKGLGSFNA DLSQHPPLIL VGDGRSGHWT RYYGFTDPGV LIEEINRLSA RRVHAKSTAI ADHHEVQP
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