Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2265 |
Symbol | |
ID | 5194450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2575730 |
End bp | 2577307 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586722 |
Product | ABC transporter related |
Protein accession | YP_001267588 |
Protein GI | 148547486 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACA CGTCGATTCT GACGCTGGAC AGCGTCTCCT TGGCCTTGCC TGATGGCAGG CCGCTGTTTA GCAACCTCAA CGAAACCTTC GACCAACGCC GCACCGGCCT GGTCGGGCGC AATGGCGTGG GCAAAAGCCT GCTAGGGCAG ATTCTTGCCG GCCGGCGTGA ACCGAGCAGC GGCCATTGTC GGCGCCTCGG GCCTGTCCAT TTGCTGGACC AGCAAGTCAT CGCGCGCAGC GCCACGCTGG CCGACCTGGC CCAAGTGGGG CCGGTGATTG CGGCGCTGGA GCGCATCGAG CAAGGCAGCA TCAAGCCCCA GGATTTCGAC ACCGTTGGCG AGCGCTGGGA TATCCGCGAG CAATTGCAGC TGCAGCTTGA GGGCCACGGG CTGGGTCAAC TCGACTGGCG CCAGCCCGCA CGGACCCTGA GCGGTGGCCA AGCCATGCGC GTGGCACTGA TTGGCGCGTG GCTCAGCGAT GCCGATTACC TGATCCTCGA TGAGCCAAGC AATCACCTGG ACAGCAACGC CCGTGCCCAG CTGCTGAGCA TGATCGAAGC CTGGGACCGT GGCTTGCTGG TGATTAGCCA CGACCGCAGC CTGCTGGCGC ACATGACACG CATTGTCGAA TTATCCAGCC TGGGCTTGCA GGCCTACGGT GGCAACTACA GCCTCTATAG TGCGCAAAAA GCCAACCAGA CGGCGCAGGC GCAGCAGCAA CTTGCCCGGC TGAAGCAGGA GCAGCAACGC CAGGCCCGTG AACTGCAGCG CCAACGCGAA GACCTGGAGC GCCATCAAGC CCGGGCCGGG CGCCAAGCCA AGCACGCCAA CCAGGCCAAA ATCCTGGTCG ACCGCAAGCA GGAGCGCAGC CAGGCCACTG CTGGCAAGCA GCGCCGCGAC CATCGCGATG CTCGGCAAAC GCTACTGGGC AAAGTGCGTG ACGCCGCCCG CGAGGTGGAG CAAGACAGCG CTATTACCTT GCACGCGCCC ACTCCTCAGC GTCATCCGGG CCGAGAGGTC TTGGCCTTGC AGGCACTTTG CTTGCCCCAT GGCACCCGCA AAGCGCTTGA CCTGCGCTTG TGCCTGGGCC AGCGCGTAGG GCTGATCGGC GCCAATGGCA GTGGCAAGTC CACCCTGCTC AGGCTGCTGA ATGGGGAATT GCCAGCATCG CCCGACAATG TGCGCCTCAG TGGCGAGACC GCCCTACTCG ACCAGCACTG CAGCACACTG GCAGGCAACC GCAGCGTGCT CGAACACCTG CGCCAAGCCA ACCCGACGCT GGCCCAGGGA AAATTGCGCA GCCGCCTGGC GCAACTGGGC CTGGATGCAG CCCGTATCGA ACTGCCCAGT AGCCTGCTGA GCGGCGGCGA GCGTATGAAG GCGGCGCTGG CCGCCGTGCT GTACCGCGAA CGGCCGCTCG ATCTGTTGCT GCTGGACGAA CCCGGCAACC ACCTGGACCT GCCATCGCTG ACAGCCCTGG AAGGTATGCT TGGGCAGTTT CGCGGGGCGC TGATAGTGGC GTCCCATGAT GCGGTATTGC TGGAAAACCT GGCGCTGGAT GAGTACTTGC TGTTGTAG
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Protein sequence | MTNTSILTLD SVSLALPDGR PLFSNLNETF DQRRTGLVGR NGVGKSLLGQ ILAGRREPSS GHCRRLGPVH LLDQQVIARS ATLADLAQVG PVIAALERIE QGSIKPQDFD TVGERWDIRE QLQLQLEGHG LGQLDWRQPA RTLSGGQAMR VALIGAWLSD ADYLILDEPS NHLDSNARAQ LLSMIEAWDR GLLVISHDRS LLAHMTRIVE LSSLGLQAYG GNYSLYSAQK ANQTAQAQQQ LARLKQEQQR QARELQRQRE DLERHQARAG RQAKHANQAK ILVDRKQERS QATAGKQRRD HRDARQTLLG KVRDAAREVE QDSAITLHAP TPQRHPGREV LALQALCLPH GTRKALDLRL CLGQRVGLIG ANGSGKSTLL RLLNGELPAS PDNVRLSGET ALLDQHCSTL AGNRSVLEHL RQANPTLAQG KLRSRLAQLG LDAARIELPS SLLSGGERMK AALAAVLYRE RPLDLLLLDE PGNHLDLPSL TALEGMLGQF RGALIVASHD AVLLENLALD EYLLL
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