Gene Pput_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2265 
Symbol 
ID5194450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2575730 
End bp2577307 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content64% 
IMG OID640586722 
ProductABC transporter related 
Protein accessionYP_001267588 
Protein GI148547486 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA CGTCGATTCT GACGCTGGAC AGCGTCTCCT TGGCCTTGCC TGATGGCAGG 
CCGCTGTTTA GCAACCTCAA CGAAACCTTC GACCAACGCC GCACCGGCCT GGTCGGGCGC
AATGGCGTGG GCAAAAGCCT GCTAGGGCAG ATTCTTGCCG GCCGGCGTGA ACCGAGCAGC
GGCCATTGTC GGCGCCTCGG GCCTGTCCAT TTGCTGGACC AGCAAGTCAT CGCGCGCAGC
GCCACGCTGG CCGACCTGGC CCAAGTGGGG CCGGTGATTG CGGCGCTGGA GCGCATCGAG
CAAGGCAGCA TCAAGCCCCA GGATTTCGAC ACCGTTGGCG AGCGCTGGGA TATCCGCGAG
CAATTGCAGC TGCAGCTTGA GGGCCACGGG CTGGGTCAAC TCGACTGGCG CCAGCCCGCA
CGGACCCTGA GCGGTGGCCA AGCCATGCGC GTGGCACTGA TTGGCGCGTG GCTCAGCGAT
GCCGATTACC TGATCCTCGA TGAGCCAAGC AATCACCTGG ACAGCAACGC CCGTGCCCAG
CTGCTGAGCA TGATCGAAGC CTGGGACCGT GGCTTGCTGG TGATTAGCCA CGACCGCAGC
CTGCTGGCGC ACATGACACG CATTGTCGAA TTATCCAGCC TGGGCTTGCA GGCCTACGGT
GGCAACTACA GCCTCTATAG TGCGCAAAAA GCCAACCAGA CGGCGCAGGC GCAGCAGCAA
CTTGCCCGGC TGAAGCAGGA GCAGCAACGC CAGGCCCGTG AACTGCAGCG CCAACGCGAA
GACCTGGAGC GCCATCAAGC CCGGGCCGGG CGCCAAGCCA AGCACGCCAA CCAGGCCAAA
ATCCTGGTCG ACCGCAAGCA GGAGCGCAGC CAGGCCACTG CTGGCAAGCA GCGCCGCGAC
CATCGCGATG CTCGGCAAAC GCTACTGGGC AAAGTGCGTG ACGCCGCCCG CGAGGTGGAG
CAAGACAGCG CTATTACCTT GCACGCGCCC ACTCCTCAGC GTCATCCGGG CCGAGAGGTC
TTGGCCTTGC AGGCACTTTG CTTGCCCCAT GGCACCCGCA AAGCGCTTGA CCTGCGCTTG
TGCCTGGGCC AGCGCGTAGG GCTGATCGGC GCCAATGGCA GTGGCAAGTC CACCCTGCTC
AGGCTGCTGA ATGGGGAATT GCCAGCATCG CCCGACAATG TGCGCCTCAG TGGCGAGACC
GCCCTACTCG ACCAGCACTG CAGCACACTG GCAGGCAACC GCAGCGTGCT CGAACACCTG
CGCCAAGCCA ACCCGACGCT GGCCCAGGGA AAATTGCGCA GCCGCCTGGC GCAACTGGGC
CTGGATGCAG CCCGTATCGA ACTGCCCAGT AGCCTGCTGA GCGGCGGCGA GCGTATGAAG
GCGGCGCTGG CCGCCGTGCT GTACCGCGAA CGGCCGCTCG ATCTGTTGCT GCTGGACGAA
CCCGGCAACC ACCTGGACCT GCCATCGCTG ACAGCCCTGG AAGGTATGCT TGGGCAGTTT
CGCGGGGCGC TGATAGTGGC GTCCCATGAT GCGGTATTGC TGGAAAACCT GGCGCTGGAT
GAGTACTTGC TGTTGTAG
 
Protein sequence
MTNTSILTLD SVSLALPDGR PLFSNLNETF DQRRTGLVGR NGVGKSLLGQ ILAGRREPSS 
GHCRRLGPVH LLDQQVIARS ATLADLAQVG PVIAALERIE QGSIKPQDFD TVGERWDIRE
QLQLQLEGHG LGQLDWRQPA RTLSGGQAMR VALIGAWLSD ADYLILDEPS NHLDSNARAQ
LLSMIEAWDR GLLVISHDRS LLAHMTRIVE LSSLGLQAYG GNYSLYSAQK ANQTAQAQQQ
LARLKQEQQR QARELQRQRE DLERHQARAG RQAKHANQAK ILVDRKQERS QATAGKQRRD
HRDARQTLLG KVRDAAREVE QDSAITLHAP TPQRHPGREV LALQALCLPH GTRKALDLRL
CLGQRVGLIG ANGSGKSTLL RLLNGELPAS PDNVRLSGET ALLDQHCSTL AGNRSVLEHL
RQANPTLAQG KLRSRLAQLG LDAARIELPS SLLSGGERMK AALAAVLYRE RPLDLLLLDE
PGNHLDLPSL TALEGMLGQF RGALIVASHD AVLLENLALD EYLLL