Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2174 |
Symbol | |
ID | 5195282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2467667 |
End bp | 2468227 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586631 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001267497 |
Protein GI | 148547395 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0733283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACGTG CCCTGCCCCG GCTACCACGC TCTTTGCTGG CGGTACTTTC GCTGAGCCTG ACGCTAGGCA TCGCCCAGGC TGACACGGCG CCGCTGTTCT CCGCCGACGG CTATCGCACC ACGCACTATC GCAGCCCGAC CCCGCAACAG GTCGAAGGCG GCCAGGTCGT CGACACCGCC ACTTTGCAAA GCCTGCTGGG CCAGACGCCC AGGCCGGTGC TGATCGACGT CTATCGCCGC CAATGGCTGC AAGGTCATTT CATCGAAGAC GAACCTCACA GCAACCTCCC CGGCAGCCTG TGGCTGGCCA ACGCCGGCGA CGGCGAACTG AGCCCGGCAT GGCAGGACTA CTTCGTGCGT AACCTGCAAA AAGCCACGGC CGGGCACCCG GACCAACCAC TGGTCTTTTA CTGCCGCTCC GATTGCTGGT TAAGCTGGAA CGCGGTAAAA CGCGCGAAAG CCTTGGGCTA TACCAACCTG TATTGGTACC GCGACGGCCT GGATGCATGG CAGCAAGCCA ACCTGCCATT GCAGCCGGCA CAACCGGTGC CGTTCCCCTG A
|
Protein sequence | MPRALPRLPR SLLAVLSLSL TLGIAQADTA PLFSADGYRT THYRSPTPQQ VEGGQVVDTA TLQSLLGQTP RPVLIDVYRR QWLQGHFIED EPHSNLPGSL WLANAGDGEL SPAWQDYFVR NLQKATAGHP DQPLVFYCRS DCWLSWNAVK RAKALGYTNL YWYRDGLDAW QQANLPLQPA QPVPFP
|
| |