| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2154 |
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| Symbol | |
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| ID | 5195163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2448030 |
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| End bp | 2448926 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640586611 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001267477 |
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| Protein GI | 148547375 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGCT GTTGGCTCTA TCTGGTGGTG GTACCGAGTA CGATGCATCA CATTCCGAAA
CTTTACGCGG CTGGTGATCC GATCCAGACA GGTGAAAGCA CGCTTGCCGA TGGGCAGGGG
GCGCCACTGT CATTCGGTCA TGCCTATCTG ACACTGCTTG TGTGCCTGTC CGGGGCTGCC
CGTTTCACGC TGAACTTCAA AGAACATGCT GTCAGGCGCG CAGATGTGCT GGTGCTGGCC
GAAGACACCA TAGCCTTGCT CAAATGTCGC TCACGATGCT TCAAGGTGTT TTTCTGCCTG
ATACCACAAG CACTTGCTGC CGAGGTCGCC TACCCACTGC CCAATTCATT GTTCGTCTTT
CTGCACGACC ATCCGCACTG TGTACTTGCC GAAAGCGAGA GGCCGCTGCT GGAAGGGTGG
CTGAGGCAGA TGCGCGATAT TGTGCGGTGC TGTGCCACTT ATCAGCACAT CATGCTGCGC
AACCAGCTGC AGAACCTTTT CCTGAAGATT GCCGAGCAGC TTCCCGTGTT ACCGACAGCA
GGCAGGGCGT TCAGCCGCAA GGAAGCGCTG AGTTGGCGAT TCTGGGAGCT GGTAGGCAAA
CACAGCACCC GGCAGCGCGA GGTTAAGTTC TATGCCGACG CGCTTAACAT CACCCCGTTC
TATCTGTCGC AACTGACAAA GGTGTATTTC AATGCAAGCC CGAAAGGTTT GATCGATCGG
CAGGTGACCC TGGAAATCAA GGCACTGCTT TCCTACAGTA ATGACGCTGT CGGGCAAATT
GCCGATGCGC TCAATTTTGC CGACGCGTCT TACCTGTGCC GCTATTTCAA ACGTCAGACC
GGTTTTTCGC TTTCCAGCTA CCGCAGGCAA GCGCAGAACG TGCAAGGGCA TGGCTGA
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| Protein sequence | MLGCWLYLVV VPSTMHHIPK LYAAGDPIQT GESTLADGQG APLSFGHAYL TLLVCLSGAA
RFTLNFKEHA VRRADVLVLA EDTIALLKCR SRCFKVFFCL IPQALAAEVA YPLPNSLFVF
LHDHPHCVLA ESERPLLEGW LRQMRDIVRC CATYQHIMLR NQLQNLFLKI AEQLPVLPTA
GRAFSRKEAL SWRFWELVGK HSTRQREVKF YADALNITPF YLSQLTKVYF NASPKGLIDR
QVTLEIKALL SYSNDAVGQI ADALNFADAS YLCRYFKRQT GFSLSSYRRQ AQNVQGHG
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