| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2078 |
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| Symbol | |
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| ID | 5192348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2354212 |
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| End bp | 2354853 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586536 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001267402 |
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| Protein GI | 148547300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCCCG TGCCCGAAAC CACGCAACTG CTCACGTTCG CCCTGATTTG CCTCGGCATG
GTCCTGACCC CAGGGCCGAA CATGATCTAC CTGATTTCCC GCTCGATCTG CCAGGGCCGC
CAAGCCGGCT TGATTTCGCT TGGCGGTGTG GCTCTGGGCT TCGTCATCTA CATGTTCTGC
GCGGCAATGG GCATCACAGC GCTGGTGATG GCGGTACCCT TTGCCTACGA CGCGCTGCGC
ATCGGTGGCG CGCTGTACCT GTTGTACCTG GCCTGGCAGG CGCTGCGGCC GGGTGGCCGT
TCGCCGTTCC AGCTCCGTGA ACTGCCCGCC GACAGCCCGC GGCGGCTATT CACCATGGGG
TTTGCCACCA GCCTGCTCAA CCCCAAGATT GCCGTCATGT ACCTGTCGCT CATGCCGCAA
TTCATCGAGC CGGGCCACGG CAGCGTGCTG TTGCAGTCGC TGGTGCTGGG TTCGACGCAG
ATCGCCATCA GCGTTACGGT CAACGCGCTG ATTGCGATCA TGGCCGGTTC CATCGCCGTG
TTCCTGGCTG GCAGGCCGCT GTGGCAACAG GTTCAGCGTT GGTTGATGGG AACGGTGCTG
GCGGGGCTGG CGGTGCGCAT GCTGTCAGAA GGGCGCCGTT GA
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| Protein sequence | MCPVPETTQL LTFALICLGM VLTPGPNMIY LISRSICQGR QAGLISLGGV ALGFVIYMFC
AAMGITALVM AVPFAYDALR IGGALYLLYL AWQALRPGGR SPFQLRELPA DSPRRLFTMG
FATSLLNPKI AVMYLSLMPQ FIEPGHGSVL LQSLVLGSTQ IAISVTVNAL IAIMAGSIAV
FLAGRPLWQQ VQRWLMGTVL AGLAVRMLSE GRR
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