Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2068 |
Symbol | |
ID | 5193979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2343239 |
End bp | 2344300 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586526 |
Product | hypothetical protein |
Protein accession | YP_001267392 |
Protein GI | 148547290 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACGG TTCCGTCCAA CCCTGCCTTT GCCCCTACCC TCTCCACCCG AGGGCGGCTC AATGGCATTC TTTTCGTCGC GCTGTTCGCG GTCGCAGTCA CTCAACTGGC GGCCCTGCCC GCTATCGCCA ACCTGGGCAT CAGCCCGCTG ATCGTGGGTA TCGTCGCAGG TGCCTTGTAT GGCAACGCGC TGCGTGACGG CGTACCGGCA AGCTGGGCGG CAGGCATCAA TTTTTCCGCT CGCGGCCTGT TACGCATTGC GGTGGCATTT TTTGGCCTGC GGGTAAGCCT GCAGGAAATT GCCGAAGTCG GCTGGTCGGG GCTGGTCGTG TCGGTGCTGG TAGTCACCAG TACCCTGCTG ATCGGCCTGT GGTGTGGCAT GAAAGTGTTC AAGCTCGACC GCGATACCGC CTTGCTCACC GCCGCCGGCA GCGCTATCTG CGGCGCTGCC GCCGTGCTGG CATTTGAATC GGCGCTGCGC AGCGCCCCCC ATAAAAGCGC CATGGCAGTC GGAAGCGTGG TGCTGTTCGG TACCTTGTCG ATGTTCCTTT ACCCACTGGC GATCAATGCC GGCTGGCTGC ATCTGGATAC CATGGGCGCC GGGCTGTTGC TGGGCGGCAC TGTCCACGAA GTGGCGCAGG TGGTAGGCGC GGCCAGCAAT GTCAGCCCCG AAGCCACGCA TGTCGCCACC ATCGTCAAGA TGACCCGGGT CATGCTGCTG GTGCCGGTAC TGCTGGTGGT GGGCCTGTGG ATCAGCCGTT CGCGCAAGGC TGGCCAGGCG CAGGGCAACG GGCGCATTGC CATGCCCTGG TTCGCTTTTG GCTTCCTGGC ACTGGTACTG GTGAATTCGC TGCAAGTGCT GCCTGGCAGC GTGACCCAGG CCGTGAACAG CCTGGACACC TTTGCCTTGA CCATGGCCAT GACGGCGTTG GGCATGGAGA CCCGCTTCAG CCAGATTCGC CAGGCCGGGC CACGGGCGCT GGCGACCGGG GCGATCCTCA ACCTGTGGCT GGTTGGCGGG GGGTTGGCGA TTACCCTGGG GGTGCAGAAG CTGTTGGGCT GA
|
Protein sequence | MATVPSNPAF APTLSTRGRL NGILFVALFA VAVTQLAALP AIANLGISPL IVGIVAGALY GNALRDGVPA SWAAGINFSA RGLLRIAVAF FGLRVSLQEI AEVGWSGLVV SVLVVTSTLL IGLWCGMKVF KLDRDTALLT AAGSAICGAA AVLAFESALR SAPHKSAMAV GSVVLFGTLS MFLYPLAINA GWLHLDTMGA GLLLGGTVHE VAQVVGAASN VSPEATHVAT IVKMTRVMLL VPVLLVVGLW ISRSRKAGQA QGNGRIAMPW FAFGFLALVL VNSLQVLPGS VTQAVNSLDT FALTMAMTAL GMETRFSQIR QAGPRALATG AILNLWLVGG GLAITLGVQK LLG
|
| |