| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1987 |
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| Symbol | |
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| ID | 5194161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2251294 |
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| End bp | 2252460 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640586445 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001267311 |
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| Protein GI | 148547209 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.675546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00431824 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTTT CTGAACGTGT TTCGCGCCTT AAAAGCTCTT TGATTCGTGA AATTCTGGCC
GCCGCGCAGC GCCCAGGGAT GATGTCTTTT GCAGGGGGGC TGCCGGCAGA GGAGATGCTG
CCCTCTGTGG ACTGGGCTGA AATGCCCACC AGCATGGGCC AGTACGGGAT GAGCGAGGGT
GAGCCGATGT TGCGTGAGGC GCTGGCCAGG GAAGCCCGTG CCTTGGGAAT CACGTGCGAG
GCTAGCCAAG TGCTCATTCT CAGCGGCTCG CAGCAGGCTC TGGACCTGAC ATCAAAACTG
TATATCGACA AAGGAACGCC GGTACTGCTG GAAGCCCCTA CCTATCTGGC TGCATTGCAA
AGCTTCCAGT TCTTCGGCGC GCACTGCCTT TCGCTGCCGA TGGAGCGGGA TGGCCCGGAC
CTGGAGTCGC TGCGCGAACT GCTGAGCCTG AACCGCCCCG CGTTCATCTA TCTGATTCCA
ACGTTCCAGA ACCCGTCGGG GCTGCGCTAC AGCGACAGGA AAAGGGACGA AGTCGCGGCG
CTTCTCGATG AGTTCAACGT CACATTGATC GAAGATGAGC CTTATCGAGA GCTGAGCTTC
GACAGCGTCG CGGCCATGCC GGTTGTCAGC CGTCTGAACA CCACAAGCTG GATTTATACC
GGTACTGTGT CCAAGACCTT GCTGCCCGGC TTGCGGATTG GGTATCTGAT TGCCAGCCCC
GACCTGTTCC CGCACTTGCT GCGGCTCAAA CAGTCGGCGG ACCTGCACAC CAGTCGGGTT
GGCCAATGGC AGGTGCTTCA ATGGCTGGGG ACAGAAAGGC TTGACCGTCA TCTTGAAGAG
TTACGCAGCT ACTACCGAGG TCGTCGAGAC GCTTTCCAGG CGGCATTGGA GACGCACTTC
GCCGACCTGG CCGAGTGGCA GATGCCAGAG GGAGGGTTGT TCTTCTGGTT GACGCTCAAG
CACCCCATCG ATACCCGGGC ATTGCTCGAG CCGGCACTGG CGGCCAATGT GGCTTTCATG
CCAGGAGAGC CCTTCTTCCC AGAGCCTGAC AAACATCCAG GGCACCTGAG GCTGAACTTC
AGCCATGTTG ATCCCGACAA GCTGGATGAA GGTCTGAAGC GTTTGTCGGA TGTCCTGCGT
CGGGCTCTGA GCCAGCAGGC GGCCTGA
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| Protein sequence | MAFSERVSRL KSSLIREILA AAQRPGMMSF AGGLPAEEML PSVDWAEMPT SMGQYGMSEG
EPMLREALAR EARALGITCE ASQVLILSGS QQALDLTSKL YIDKGTPVLL EAPTYLAALQ
SFQFFGAHCL SLPMERDGPD LESLRELLSL NRPAFIYLIP TFQNPSGLRY SDRKRDEVAA
LLDEFNVTLI EDEPYRELSF DSVAAMPVVS RLNTTSWIYT GTVSKTLLPG LRIGYLIASP
DLFPHLLRLK QSADLHTSRV GQWQVLQWLG TERLDRHLEE LRSYYRGRRD AFQAALETHF
ADLAEWQMPE GGLFFWLTLK HPIDTRALLE PALAANVAFM PGEPFFPEPD KHPGHLRLNF
SHVDPDKLDE GLKRLSDVLR RALSQQAA
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