Gene Pput_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1985 
Symbol 
ID5193372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2249291 
End bp2249830 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID640586443 
ProductDSBA oxidoreductase 
Protein accessionYP_001267309 
Protein GI148547207 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.025834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTC TCAAAGTCCC GGTAAGTGCC GACGACCATC GCCAGGGAAG TGCGCATGCC 
AAGGTCACCT TGGTCGAATT TGGCGACTAT GAATGTCCCT ATTGCGGTGA AGCTTATTGG
ATGGTCAAGA ATCTGCAACA GCATTTTCGC GATGACTTGC TGTTTGTGTT CCGTAACTTC
CCTCTGACCA CCGCTCACCC CCATGCATTG GGTGCAGCGG TCACCGCTGA GTATGCCGGG
AGTCGAGGAT TCTTCTGGGA GGCCCACGAC GGATTGTACG AAAATCAGGA TCGATTGGGC
CTGCCGCTGT ATCGCGCCAT CGTTCTCAAA CACGGCCTTT CCAGGGAGGA ATTCGATCTT
GCAATGCAAG AGGATACTTA CATTCCCAAA ATACAAGCCG ATTTCAATGG CGGTGTACGC
AGCGGCGTGA ATGGCACCCC AGCGTTTTAC ATTGACGGGC TTCGGTATGA CGGAGTTCCA
GAGTTCATCG GGATGAGTCA GATGATTGAG CTTTTGTTAG TGCGTGGACG AAATCGCTAG
 
Protein sequence
MATLKVPVSA DDHRQGSAHA KVTLVEFGDY ECPYCGEAYW MVKNLQQHFR DDLLFVFRNF 
PLTTAHPHAL GAAVTAEYAG SRGFFWEAHD GLYENQDRLG LPLYRAIVLK HGLSREEFDL
AMQEDTYIPK IQADFNGGVR SGVNGTPAFY IDGLRYDGVP EFIGMSQMIE LLLVRGRNR