| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1981 |
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| Symbol | |
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| ID | 5192973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2246162 |
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| End bp | 2247145 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640586440 |
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| Product | luciferase family protein |
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| Protein accession | YP_001267306 |
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| Protein GI | 148547204 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03571] luciferase-type oxidoreductase, BA3436 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.960936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00581741 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATCGGC CGAGCACGAT TCCTTACCAG CAACATCGAG GGTTCAGCCG AACCTTCACT
CAGGGGCATT TGAGCCTTGG ATTATTCTTT CCCATGGAGG CGTTCGACGG GGACACTCCG
AGCATGCTCA ACCAGGTCAC ACTGGCTAAA CAAGCCGAGG CGCTGGGCTT CTGCGCGCTC
TGGTTTCGCG ACGTGCCGCT TCGCGACCCT GGCTTCGGCG ATGTCGGCCA AGTCTTCGAC
CCCTGGGTTT ACCTGGGTTA TATGGCCGCC CATACCTCGG AGATTGCACT TGGCACCGCC
TCCATCGCCA TCCCGCTGCA CCATCCCCTG CACACGGCCA AGGCGTCTGC CAGCGTAGAT
CAGTTGAGCA CTGGTCGCTT GATTCTGGGG GTTGCTTCGG GAGATCGGCC AGTGGAGTTT
TCGGCGTTTG GCGTCGATCC CGAAAGGCGT GGAGAGATCT TTCGAGAACA CTACGAAGTG
ATTCGCCGCG CCCACAGCAC CAGTTTTGAG CCCATCCACT GGAGCACTGG TGAAATGCAA
GGCGCAGACC TGATTCCGAA ACCGACCACC CAATTCATTC CAATGCTCGT GACCGGCAAC
AGTCGCCAGT CACTGGATTG GATCGCGCGT GAGAGCAACG GATGGATCAA CTATCCACGC
ATTCCGAACA TGCAGCGGCT GATCGTGGAA GATTGGCGAC TGGAGGTCAC GAAACAATGT
GGTTCTGTGT ATAAGCCCTT TACTCAGTCG CTGTACATCG ATCTCGATGA GAATCCGTCA
ACGCCACCCA CACGTATCCA TTTGGGGTTC AGACTTGGAC GTTACCATCT ACGTTTTTTG
CTGGAGTCGC TTGAGGAAAT CGGCGTGGAC CACGTCATTC TCAATCTCAA ATACGGCAAG
CGCCCTGCGG TGGAAGTTAT TGAGGAATTG GGTACGCACA TCGTTGCGCA GTTCGGAGTG
CAGCCGCGTC AGGCAGCTCA TTGA
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| Protein sequence | MYRPSTIPYQ QHRGFSRTFT QGHLSLGLFF PMEAFDGDTP SMLNQVTLAK QAEALGFCAL
WFRDVPLRDP GFGDVGQVFD PWVYLGYMAA HTSEIALGTA SIAIPLHHPL HTAKASASVD
QLSTGRLILG VASGDRPVEF SAFGVDPERR GEIFREHYEV IRRAHSTSFE PIHWSTGEMQ
GADLIPKPTT QFIPMLVTGN SRQSLDWIAR ESNGWINYPR IPNMQRLIVE DWRLEVTKQC
GSVYKPFTQS LYIDLDENPS TPPTRIHLGF RLGRYHLRFL LESLEEIGVD HVILNLKYGK
RPAVEVIEEL GTHIVAQFGV QPRQAAH
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