Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1923 |
Symbol | |
ID | 5191401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2197446 |
End bp | 2198060 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640586385 |
Product | ERF family protein |
Protein accession | YP_001267252 |
Protein GI | 148547150 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGCG CTCAGGCCGA GATCGGACCG GTGTTCCGCG ACAAGTACAA CAGCCAGACC AACAGCTCTT ATGCTGCCCT TGAGTCGATC GACAAGAAGA TCGCCCCAAC CTACACGCTG CACGGTTTTT CCCTCTCGTT CGGTACCGAT GACAGTCCGC TGGCCGGGCA CATCCGCACC GTCTGCGACT GCATGCACGA GGCCGGGCAC ACCAAGCGCT ACTACGTCGA CCTGCCAATC GACTCGACCG GCATCAAGGG CAGCGTCAAC AAGACCGGCG TGCACGCCAA TGGCTCTACC TACAGCTATG CCCGGCGCTA CCTGACGATG ATGATCTTCA ACGTCGTGCT GACGAACGAA GACAACGACG GGAACGGCGG CGGTGAGCAA CCCCAAAGCC TTGGGGAGCT TATGAATGAG TGGATCCCGA AGGCCTACGC CGCTGACTCC AAAGACTCGC TCACAGCGGT ATGGCAGGCG GGCGTCAAGT TCGCCCAGGA CCTAAAGGCC ACCGACAAGA AAACGGCCGA CGAGCTCTAC GAGGCATTGA AGGTAGCGGT TAGCGCTCGC GGCTCTCAGC TCAGCGCAGC ACCACAAGTG GGAGCAAGCC AATGA
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Protein sequence | MVRAQAEIGP VFRDKYNSQT NSSYAALESI DKKIAPTYTL HGFSLSFGTD DSPLAGHIRT VCDCMHEAGH TKRYYVDLPI DSTGIKGSVN KTGVHANGST YSYARRYLTM MIFNVVLTNE DNDGNGGGEQ PQSLGELMNE WIPKAYAADS KDSLTAVWQA GVKFAQDLKA TDKKTADELY EALKVAVSAR GSQLSAAPQV GASQ
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