Gene Pput_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1923 
Symbol 
ID5191401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2197446 
End bp2198060 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content60% 
IMG OID640586385 
ProductERF family protein 
Protein accessionYP_001267252 
Protein GI148547150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGCG CTCAGGCCGA GATCGGACCG GTGTTCCGCG ACAAGTACAA CAGCCAGACC 
AACAGCTCTT ATGCTGCCCT TGAGTCGATC GACAAGAAGA TCGCCCCAAC CTACACGCTG
CACGGTTTTT CCCTCTCGTT CGGTACCGAT GACAGTCCGC TGGCCGGGCA CATCCGCACC
GTCTGCGACT GCATGCACGA GGCCGGGCAC ACCAAGCGCT ACTACGTCGA CCTGCCAATC
GACTCGACCG GCATCAAGGG CAGCGTCAAC AAGACCGGCG TGCACGCCAA TGGCTCTACC
TACAGCTATG CCCGGCGCTA CCTGACGATG ATGATCTTCA ACGTCGTGCT GACGAACGAA
GACAACGACG GGAACGGCGG CGGTGAGCAA CCCCAAAGCC TTGGGGAGCT TATGAATGAG
TGGATCCCGA AGGCCTACGC CGCTGACTCC AAAGACTCGC TCACAGCGGT ATGGCAGGCG
GGCGTCAAGT TCGCCCAGGA CCTAAAGGCC ACCGACAAGA AAACGGCCGA CGAGCTCTAC
GAGGCATTGA AGGTAGCGGT TAGCGCTCGC GGCTCTCAGC TCAGCGCAGC ACCACAAGTG
GGAGCAAGCC AATGA
 
Protein sequence
MVRAQAEIGP VFRDKYNSQT NSSYAALESI DKKIAPTYTL HGFSLSFGTD DSPLAGHIRT 
VCDCMHEAGH TKRYYVDLPI DSTGIKGSVN KTGVHANGST YSYARRYLTM MIFNVVLTNE
DNDGNGGGEQ PQSLGELMNE WIPKAYAADS KDSLTAVWQA GVKFAQDLKA TDKKTADELY
EALKVAVSAR GSQLSAAPQV GASQ