Gene Pput_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1885 
Symbol 
ID5190776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2159699 
End bp2160445 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID640586349 
ProductGntR domain-containing protein 
Protein accessionYP_001267217 
Protein GI148547115 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACC CGACCGCCAG CCCCCCTCAA CAGCCTCGCC GCCTGGCCGA AGCACTGGTC 
GAGCGCTTCG CCCAACGCAT GCGTGAGGGC ACGCTCAAGC GTGGTGACAA GCTGCCGACC
GAAGCCACAC TGATCGAAAC CGAAGGCGTC AGCCGCTCGG TAGTACGCGA AGCGTTGTCG
CGCATGCAGG CAGCGGGCCT GGTCGAGACC CGCCACGGCG TGGGCACCTT CGTGCTGGAC
ATGCCGGCAC CGGAGAGCTT CAACGTGGGG CCGGCAACCA TCAGCCTGCT GTCCGATGTG
CTCGACCTGC TGGAATACCG CCTAAGCCTT GAAGTACAAG CCGCCGGCAT GGCCGCCGAA
CGGGCCACGC CACAGGCACT CGAAGAACTG CAGCAAGCCT TGGAAGCCCT GATGCAAGGC
CCGGAAAAAT CCGGCAGCAC GACCAACGCC GACTTCCAGT TTCACCTGAA AATTGCCAAG
GCCGCGGGTA ACCAGTACCT GATCGATATC ATGAAGCACC TGGGCACCAA GATGATCCCC
CGCACGCGCA TGAACTCTGC CTATACCGGG CAGAGCAACC GCAGTACCTA CCTGGCCGGT
ATCAACGCCG AACATCAGCA GATCTACGAC GCCATCGCCA GCCGCCAGGT GGATGCGGCG
CGCGCCGCCA TGTACCTGCA CCTGAGCAAC AGCCGTATGC GCCTGCGTGA GGCGCAACGG
CTACAGGCAT TCTACAGCGA GGCCTGA
 
Protein sequence
MPNPTASPPQ QPRRLAEALV ERFAQRMREG TLKRGDKLPT EATLIETEGV SRSVVREALS 
RMQAAGLVET RHGVGTFVLD MPAPESFNVG PATISLLSDV LDLLEYRLSL EVQAAGMAAE
RATPQALEEL QQALEALMQG PEKSGSTTNA DFQFHLKIAK AAGNQYLIDI MKHLGTKMIP
RTRMNSAYTG QSNRSTYLAG INAEHQQIYD AIASRQVDAA RAAMYLHLSN SRMRLREAQR
LQAFYSEA